Gene Xcel_1240 details

Gene Information

• Locus tag: Xcel_1240
• ID: 8648758
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xylanimonas cellulosilytica DSM 15894
• Kingdom: Bacteria
• Replicon accession: NC_013530
• Strand: -
• Start bp: 1346548
• End bp: 1351446
• Gene Length: 4899 bp
• Protein Length: 1632 aa
• Translation table: 11
• GC content: 78%
• Product: DEAD/H associated domain protein
• Protein accession: YP_003325829
• Protein GI: 269956040

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACGTCGC CCCTCGACCG CCTCGGCCCC GCGACCCGGG ACTGGTTCGC GGGTGCGTTC 
GAGGGCCCGA CGGCGGCGCA GGACGGCGCC TGGGACGCGA TCGGGCAGTG CAAGCACGCC 
CTCGTCGTCG CTCCCACCGG GTCCGGCAAG ACGCTCGCGG CGTTCCTGTG GGCGATCGAC 
CGGCTGCACC ACGAGCCGGT GCCCGAGCGT GCGCGCCGCT GCCGCGTGCT GTACGTGTCG 
CCGCTCAAGG CGCTCGCCGC GGACGTGCAG CGCAACCTGC GCTCCCCGCT GACCGGCATC 
CGCCAGGCCG CGGCCCGCGC GGGGATCGAG ACGCCGGAGA TCGCCGTCGG CATGCGCACC 
GGCGACACGC CGCCGAGCGA GCGCCGCTCC TTCGCCACCC GCCCGCCGGA CGTCCTCGTC 
ACGACGCCGG AGTCGCTCTT CCTGGTGCTC ACGAGCCAGG CGCGCGCCGG CCTGCTGGGC 
GTCGAGACGG TGATCCTCGA CGAGATCCAC GCCGTCGCCG GGACCAAGCG CGGCGCGCAC 
CTCGCGCTGA GCCTGGAGCG CCTGGACGCA CTCCTGGTCG CCTCCGGGTC GCGTCCGGCC 
CAGCGTGTCG GGCTCTCGGC AACGGTCCGC CCCGTCGAGG TGGTCGCCCA GTTCCTCGGC 
GGCCACCGCA CGGCCGACGA CGGCGGCCGC GAGGTCGTGG TCGTCCAGCC GCCGGCCACC 
AAGCGGTGGG CGATCGACGT CGTCGTCCCT GTGCCGGACC TCGCCGACCT CGACGCCGTC 
GGGCAGCCCG GTGGCTCCGA CGACGACGCC GGACCCGGCG CCCCGGACCT GACCGGTGAC 
GCGGCCTCCC CCCTGCGCCG TGCGTCGGTG TGGCCGCACG TCGAGGAACG CGTGGTCGAC 
CTCGTCGCCG GCCACCGCTC CACCCTGGTG TTCACCAACT CGCGGCGCGG GGCCGAGCGG 
CTGACGAGTC GCATGAACGA GCTGTGGTCG CAGCGCCTGG GCGAGGCGGT CGACGACCAG 
GGCGCCACCT GGCCGGCGGC GGCTCCCGGG CAGTCGGGCA CCGCCGTCGG GCGATCTCCC 
GACGCCGAGG TGCTGGCGCG TGCCCACCAC GGCTCGATGA GCCGCGCCGA GCGGACCCGC 
ACCGAGTCGG AGCTCAAGGA GGGGCGGCTG CCCGCCGTCG TCGCCACCAG CTCGTTGGAG 
CTCGGCATCG ACATGGGGGC GGTCGACCTC GTCGTGCAGG TGGGTGCGCC GCCGTCGGTG 
GCCAGCGGGC TGCAGCGCAT CGGACGGGCA GGCCACCAGG TCGGGGCGGT CTCGCACGGC 
GTCGTCTTCC CCACGCACCG GGGCGACCTG GTGCCGGCCG CCGTCGTCGC GCAGCGCATG 
CGCGCCGGCG AGATCGAGCC GCTGCACGTG CCGGCGAACC CGCTCGACGT GCTGGCCCAG 
CAGGTGGTGG CCGCGCTCGC CACCGACGAC TGGGACGCGG CCGAGCTGCT GGCGACGTTC 
CGCCGCGCCC ACCCGTACGC GCACCTGGGC GACGCGACCT GGAACGCCGT GCTCGACATG 
CTCGCGGGCC GCTACCCCAG CGAGGACTTC GCGGAGCTGC GCGCCCGCAT CGTGTGGGAC 
CGCGCCACGG ACCGCCTCTC GGGGCGGCCG GGCGCGCTGC GGCTCGCGGC GACCAGCGGC 
GGCACCATCC CGGACCGCGG CCTGTACGGC GTCTACCTCG CGGGCTCCGA GGAGGGCGCC 
CAGCGCGGCG GCAAGCGGGT GGGCGAGCTG GACGAGGAGA TGGTCTACGA GTCGCGCGTC 
GGCGACACGT TCACGCTCGG CTCGTCGACA TGGCGCATCG AGGACATCAC GCCCGACCGC 
GTCCTGGTCA GCCCGGCCCC CGGGCTCCCC GGACGCCTCC CGTTCTGGAA GGGCGACGCC 
CAGGGCCGCC CGGTCGAGCT CGGCCGGGCG ATGGGCGCGT TCGTCCGCAC GATCGACACC 
GAGCTCGCTG CCGGGCCCGA CGGCGCCGAC GCCGGCCGGG CGCGCCTGCG CGAGGCAGGA 
CTCGACGCCT GGGCGGCCGA CAACCTCGCC GCGTACCTGA CCGAGCAGCG CACCGCGACG 
GGACGCCTCC CCGACGACCG CACCATCGTC GTCGAGCGCT TCCGCGACGA GCTCGGCGAC 
TGGCGCGTGG TGGTCCACTC CCCCTTCGGG GCGCGCGTGC ACGCCCCCTG GTCGCTCGTC 
CTCGCCGGTC GGCTCCGCGC GCGGTACGGG CTCGACGTCG CGGTCATGCA CTCCGACGAC 
GGCATCGTGC TGCGGCTGCC CGACTCGGGG GCGGGCTGGG ACGACCTGGG CGCGGCACCG 
ACGTGGGCCG ACGGCGGCCC GGGCGGTGCC GGGAGCGACG CCCCCATCGT GACCGCCGAG 
GACCTGCTCG TCGACCCGGA CGACGTGGTC GGCGCGGTGC GTGACGAGCT CGGATCGTCG 
GTGCTGTTCG CGGCCCGCTT CCGGGAGGCG TCGGCCCGCG CCCTGCTCCT GCCCCGGCGC 
CGCCCCGACC GCCGCCAGCC GCTCTGGCAG CAGCGCCAAC GCGCGGCCCA GCTCCTCCAG 
GTCGCGGCGC AGTTCCCCGA CTTCCCGATG ACGCTCGAGG CCGCGCGCGA GTGCCTCCAG 
GACGACTTCG ACGTCGCCGC GCTCGCCGCG CTCATGGGCG ACCTCGGCGC GGGCCGCGTC 
CGGATCGTCG AGGTCGCCAC GCAGACGCCC TCGCCGTTCG CGCAGTCGCT GCTCTTCGGC 
TACACCGCCC AGTTCCTGTA CGACGGCGAT GCGCCGCTGG CCGAGCGACG CGCGGCCGCC 
CTCTCGCTGG ACCCGGACCT GCTGGCCGAG CTGCTGGGCG ACCAGGGCGC GACGGCGATC 
GCCGACCTGC TCGACCCGGC CGCCGTCGAG CGCACGGAGT CCGAGCTGCA GGCGCTCGCC 
CCCGACCGGC AGGCCAAGGA CGCCGAAGGG CTGTGGGACG TGCTGCGCCG CACGGGCCCG 
CACCCGCTCG CGGCGCTCGA GGCGCGCACA CGCGAGGAGG CGCGCGGACA GGTGCCCGAC 
TGGCTCGCCG AGCTCGAACG CGCGCGTCGC CTGATCCGGG TGCGGTTCGC GGGGGCGGAA 
CAGTGGGCGG TGGTCGAGGA CGCCGGGCGG CTGCGGGACG CGCTGGGGGT CGCGCTGCCC 
GTCGGGGTGC CCGAGACGCT CACCGAGCTG GTGCCCGACG CCCTGGGCGA CCTGGTGCGT 
CGCCACGTGC GCACGCACGG GCCGGTGGCC GCCGCCGACG TCGCGGCGCG CTACGGGCTG 
GGCGTCGCCG TCGTGCTGCA CGCCCTGGCC CGGCTGCAGG CCGCCGGCAC CGTCGTCCGC 
GGGGCGTTGC GGCCCTCGTC GCTGGGCGGG ACGGGCGACG AGTGGTGCGA CCCGGAGGTG 
CTGCGCACGC TGCGGCGGCG CTCGCTCGCC GCGCTGCGCG CCGAGGTCGA GCCGGTCGAA 
CCGCAGGCCC TGGGCGTGTT CCTGCCGCGC TGGCAGCAGG TCGGCTCGCC CGCCGCCCCG 
CGCGGCGTGG ACGGGGTGCT CCGGGCGGTC GAGCAGCTCG CGGGGGCGGC GGTACCGGCC 
AGCGCCCTGG AGACCCTCGT GCTCCCGGCG CGGGTGCCGG GCTACTCCCC CGCGCTGCTG 
GACGAGCTGA CCACCGCCGG CGAGGTGCTG TGGTGCGGTC ACGCGCGCCT GCCCGGCTCG 
GGCGGTGGCG ACGGCATGGT CTCGCTCCAC CTGGCCGACG GTGCCGCGCT CACCCTGCGC 
CCGCCGGACC CGGTCGAGCC CGGCGGCCCG CTGGACACCC CGCTGCACCG CGCGGTGCTC 
GACCTCCTCA CCGGCTCGGG CGGGTTCTTC CTGCCCCGCC TGGCCGAGCT CGCGGGGACG 
TCCGCCTCGG CGACCGTCGA CGTGCTGTGG GACCTCGTGT GGGCCGGGCG GGTCACCAAC 
GACGGCCTTG GGCCGCTGCG CGAGGCCGTC GGCACCGGGG CGGGTGGGGC CCACCGAGCG 
CCGCGCGCCC CCGCGCGGGC GCGGCCGGTG AGCCGCACCC GGTTCGGCGG GCTCGGGCGC 
CCGGCGTCAT CAGGTTCGCC GGTGTCGGCG GCCGCGGTGG TCCGGACCGG CGGCGGGCGC 
TGGTCGGCGC TGCCCGACGT CGAGCGCGAC CCGACGATCC GCGCGCACGC CCTGACCCAG 
GTGCTCCTGG AGCGGCACGG GGTGCTCACG CGCGCGGTGG CGCCGTCGGA GGGTGCCGCG 
GGCGCGTTCC GCGACGTGTA CCGGGTGCTG CGCGAGCTCG AGGAGCGTGG TGCGGTGCGC 
CGCGGCTACT TCGTCGAGGG CCTCGGCGGG TCCCAGTTCG CCCTGCCCGG CGCGGTCGAC 
CAGCTTCGCA CCGACGCCGC GGACCGCTCG CGCGCGCACG AGAGCGACGA CGACGTCGCA 
CGTCCTGCGA GCGCCCCGGG ACGTGGCTCG ACGCGGCCCG GGGGCGACAC GCGCCCGCCG 
GAGGCCCTGC TGCTCGCCGC CACCGATCCC GCCAACCCGT ATGGGGCGGC GCTGGCCTGG 
CCGCGCACCG GCGGGGCTTC CTCCGTGCAC CGCCCGGGGC GCAAGGCGGG CGCCGTCGTC 
GTCCTGGTGG ACGGTGACCT CGTCCTCTAC GTCGAGCGCG GCGGGCGGAC CGTCCTGTCG 
TTCGCCCCGC CCGGGCCCGG CGGGGCGCGG CGGACGGGTG CGGCCGCCCG CGAGCTCGCG 
GCAGCGGCCA GCAGCGGACG TCTCGGCCGG GTGCTGATCC AACGCGTCGA CGGCGTCCCG 
GCCCTCACCG CCGCCCGGGA CCGCACTCCC GCGGCGGCCG CGCTGCTCGA CGCGGGTTTC 
GCGGTGACAC CGCGCGGGCT CCGCGTGGCA GGCGGCTGA 

 

Protein sequence

MTSPLDRLGP ATRDWFAGAF EGPTAAQDGA WDAIGQCKHA LVVAPTGSGK TLAAFLWAID 
RLHHEPVPER ARRCRVLYVS PLKALAADVQ RNLRSPLTGI RQAAARAGIE TPEIAVGMRT 
GDTPPSERRS FATRPPDVLV TTPESLFLVL TSQARAGLLG VETVILDEIH AVAGTKRGAH 
LALSLERLDA LLVASGSRPA QRVGLSATVR PVEVVAQFLG GHRTADDGGR EVVVVQPPAT 
KRWAIDVVVP VPDLADLDAV GQPGGSDDDA GPGAPDLTGD AASPLRRASV WPHVEERVVD 
LVAGHRSTLV FTNSRRGAER LTSRMNELWS QRLGEAVDDQ GATWPAAAPG QSGTAVGRSP 
DAEVLARAHH GSMSRAERTR TESELKEGRL PAVVATSSLE LGIDMGAVDL VVQVGAPPSV 
ASGLQRIGRA GHQVGAVSHG VVFPTHRGDL VPAAVVAQRM RAGEIEPLHV PANPLDVLAQ 
QVVAALATDD WDAAELLATF RRAHPYAHLG DATWNAVLDM LAGRYPSEDF AELRARIVWD 
RATDRLSGRP GALRLAATSG GTIPDRGLYG VYLAGSEEGA QRGGKRVGEL DEEMVYESRV 
GDTFTLGSST WRIEDITPDR VLVSPAPGLP GRLPFWKGDA QGRPVELGRA MGAFVRTIDT 
ELAAGPDGAD AGRARLREAG LDAWAADNLA AYLTEQRTAT GRLPDDRTIV VERFRDELGD 
WRVVVHSPFG ARVHAPWSLV LAGRLRARYG LDVAVMHSDD GIVLRLPDSG AGWDDLGAAP 
TWADGGPGGA GSDAPIVTAE DLLVDPDDVV GAVRDELGSS VLFAARFREA SARALLLPRR 
RPDRRQPLWQ QRQRAAQLLQ VAAQFPDFPM TLEAARECLQ DDFDVAALAA LMGDLGAGRV 
RIVEVATQTP SPFAQSLLFG YTAQFLYDGD APLAERRAAA LSLDPDLLAE LLGDQGATAI 
ADLLDPAAVE RTESELQALA PDRQAKDAEG LWDVLRRTGP HPLAALEART REEARGQVPD 
WLAELERARR LIRVRFAGAE QWAVVEDAGR LRDALGVALP VGVPETLTEL VPDALGDLVR 
RHVRTHGPVA AADVAARYGL GVAVVLHALA RLQAAGTVVR GALRPSSLGG TGDEWCDPEV 
LRTLRRRSLA ALRAEVEPVE PQALGVFLPR WQQVGSPAAP RGVDGVLRAV EQLAGAAVPA 
SALETLVLPA RVPGYSPALL DELTTAGEVL WCGHARLPGS GGGDGMVSLH LADGAALTLR 
PPDPVEPGGP LDTPLHRAVL DLLTGSGGFF LPRLAELAGT SASATVDVLW DLVWAGRVTN 
DGLGPLREAV GTGAGGAHRA PRAPARARPV SRTRFGGLGR PASSGSPVSA AAVVRTGGGR 
WSALPDVERD PTIRAHALTQ VLLERHGVLT RAVAPSEGAA GAFRDVYRVL RELEERGAVR 
RGYFVEGLGG SQFALPGAVD QLRTDAADRS RAHESDDDVA RPASAPGRGS TRPGGDTRPP 
EALLLAATDP ANPYGAALAW PRTGGASSVH RPGRKAGAVV VLVDGDLVLY VERGGRTVLS 
FAPPGPGGAR RTGAAARELA AAASSGRLGR VLIQRVDGVP ALTAARDRTP AAAALLDAGF 
AVTPRGLRVA GG