Gene Xcel_1231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXcel_1231 
Symbol 
ID8648749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylanimonas cellulosilytica DSM 15894 
KingdomBacteria 
Replicon accessionNC_013530 
Strand- 
Start bp1337220 
End bp1337858 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content77% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003325820 
Protein GI269956031 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.814793 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCGGC CCCGACTGCA CGACGACGCG CTGCGCACCC GGCTGCTCGA GGTGACCTCC 
GAGGTGATCT CGTCCGACGG CGAGTCGGCC GTCACGGTGC GCGGGGTCGC CGTGCGGGCC 
GGGACCAGCG CGTCGGCGGT CTACGCGCTC TTCGGCTCAC GCGACGCGCT CGTCGCCGCG 
GTGAGCGAGG AGGGCTTCCG CCGGTTCGGC GCGCGCCTGG CGGCGGCCGC GCACACCGAC 
GACCCCCTCG CCGACCTGCG GGTCCTCGGC CGGGCCTATC GGGACGGCGC CCTCGCGAAC 
CCGCACTTCT ACCGGGTCAT GTTCGAGCGC GCCGTCCCGC CCGGGTCCGA CGCCCCGCCC 
GCCGTCGACC GCCCGACGTT CCTCGTGCTC CGCGACGCCG TCGCGCGCGT GCTGGCGCTC 
CACGAGGCAC CGGCCGCGCC CGGCGCCGGC CCCGGAGGGA GAGCGTCGGA GGACGTCGCA 
CTGGCCCTCT GGTCGCTCGT CCACGGCCTG GTCAGCCTGG AGCTCGCCGG CCTCGTGCCG 
GGTGACGACG CCGCGCGGTC GGATCGCTAC GACGCCACGC TCGCCGCGGC CGGGCCGGCA 
CTCCTCACGG CGCTGGCCGC CAGGCCCTCC GGTGGTTGA
 
Protein sequence
MARPRLHDDA LRTRLLEVTS EVISSDGESA VTVRGVAVRA GTSASAVYAL FGSRDALVAA 
VSEEGFRRFG ARLAAAAHTD DPLADLRVLG RAYRDGALAN PHFYRVMFER AVPPGSDAPP 
AVDRPTFLVL RDAVARVLAL HEAPAAPGAG PGGRASEDVA LALWSLVHGL VSLELAGLVP 
GDDAARSDRY DATLAAAGPA LLTALAARPS GG