| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_1230 |
|---|
| Symbol | |
|---|
| ID | 8648748 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | + |
|---|
| Start bp | 1335346 |
|---|
| End bp | 1337031 |
|---|
| Gene Length | 1686 bp |
|---|
| Protein Length | 561 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | beta-lactamase domain protein |
|---|
| Protein accession | YP_003325819 |
|---|
| Protein GI | 269956030 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.786128 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCCACC CGCACCCCGA GCTGACCCTG CCCCCCGCCC TCCCGGCGGG CGGCCTGCGC
ATCGTCGCCC TCGGCGGCCT CGGCGAGGTC GGCCGCAACA TGGCCGTGCT GGAGTACGAC
GGACGCCTGC TCATCATCGA CTGCGGCGTC CTCTTCCCCG AGGACAACCA GCCGGGCGTC
GACCTGATCC TGCCGGACTT CGACTACATC CGGGACCGGC TCGACGACGT CGAAGCCGTC
GTCCTGACCC ACGGCCACGA GGACCACATC GGCGCCGTGC CCTACCTGCT GCGCCTGCGC
CGCGACATCC CGCTGCTGGG CTCCCAGCTC ACCCTCGCGT TCGTCGAGGC CAAGCTCAAG
GAGCACCGCA TCTCGCCCGT GACCCTCGCG GTCAAGGAGG GGCAGACGGA GAAGCTCGGA
CCGTTCGACC TCGAGTTCGT CGCCGTCAAC CACTCCATCC CCGACGCGCT CGCCGTCGCC
GTGACGACAC CCGCCGGCAC CGTGCTGCAC ACCGGCGACT TCAAGATGGA CCAGCTCCCC
CTCGACGGGC GGGTCACCGA CCTGCGCGCC TTCGCCCGGC TCGGGGAGAA GGGCGTCGAC
CTGTTCATGG TCGACTCGAC GAACGCCGAG GTGCCCGGGT TCGTCACCCC CGAGGTCGAG
ATCGGCCCCG TGCTCGACAG CGTGTTCGCC CAGGCCGAGA AGCGCATCAT CGTCGCCTCG
TTCGCCTCCC ACGTGCACCG CGTCCAGCAG GTGCTCAACG CGGCCCACTC GCACGGCCGC
CGCGTCGCGC TGGTCGGGCG CTCGATGGTG CGCAACATGG CCATCGCCGC CGACCTCGGG
TACCTCCGCG TGCCCGAAGG GGTGCTCATC GACCTGAAGA AGACGGGCGA CCTGCCCGAC
GACCAGATCG TCTACATGAG CACCGGCAGC CAGGGCGAGC CGATGGCCGC GCTGAGCCGC
ATGTCCAACG GCGACCACCA GGTCCGGATC AGCCACGGCG ACACCGTGAT CCTCGCGTCC
TCGCTCATCC CCGGCAACGA GAACTCGGTG TTCCGCGTCA TCAACGGCCT CACCCGCCTC
GGCGCCCGCG TGGTCCACTC GGGCAACGCG AAGGTGCACG TCTCCGGGCA CGCCAGCGCC
GGCGAGCTCC TGTACTGCTA CAACATCCTG CGGCCCAAGA ACGTCATGCC CGTGCACGGC
GAGGTGCGCC ACCTCGTCGC CAACGGGGCG CTCGCGGTGA AGACCGGCGT GCCACCGGAG
CGGGTCGTGC TGGCCGAGGA CGGGGTCGTC ATCGACCTCG TCGACGGCAA GGCGGCGGTC
GTGGGCGCAG TGCCGTGCGG CTACGTGTAC GTGGACGGCT CGTCCGTGGG CGAGATCACC
GAGGCCGAGC TCAAGGACCG CCGCATCCTC GGCGAGGAGG GCTTCGTGTC CGTCTTCGCC
GTCGTCGACT CCGCGACGGG CAAGGTGCTC GCAGGCCCGC AGATCCTGGC CCGCGGCATG
GCCGAGGACG CCGCGGTGTT CGACGAGATC CGGCCCGAGC TCGTGCGCGC CCTCGAGGAC
GCGATCACCG GCGGCGCCAC CGACACCTAC CAGCTCCAGC AGGTCATGCG CCGCATCGTC
GGGCAGTGGG TCAGCCGGCG GCTGCGCCGC CGCCCGATGA TCGTGCCGAT CGTCGTCGAA
GCCTGA
|
|---|
| Protein sequence | MSHPHPELTL PPALPAGGLR IVALGGLGEV GRNMAVLEYD GRLLIIDCGV LFPEDNQPGV
DLILPDFDYI RDRLDDVEAV VLTHGHEDHI GAVPYLLRLR RDIPLLGSQL TLAFVEAKLK
EHRISPVTLA VKEGQTEKLG PFDLEFVAVN HSIPDALAVA VTTPAGTVLH TGDFKMDQLP
LDGRVTDLRA FARLGEKGVD LFMVDSTNAE VPGFVTPEVE IGPVLDSVFA QAEKRIIVAS
FASHVHRVQQ VLNAAHSHGR RVALVGRSMV RNMAIAADLG YLRVPEGVLI DLKKTGDLPD
DQIVYMSTGS QGEPMAALSR MSNGDHQVRI SHGDTVILAS SLIPGNENSV FRVINGLTRL
GARVVHSGNA KVHVSGHASA GELLYCYNIL RPKNVMPVHG EVRHLVANGA LAVKTGVPPE
RVVLAEDGVV IDLVDGKAAV VGAVPCGYVY VDGSSVGEIT EAELKDRRIL GEEGFVSVFA
VVDSATGKVL AGPQILARGM AEDAAVFDEI RPELVRALED AITGGATDTY QLQQVMRRIV
GQWVSRRLRR RPMIVPIVVE A
|
|---|
| |