Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xcel_1224 |
Symbol | |
ID | 8648742 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylanimonas cellulosilytica DSM 15894 |
Kingdom | Bacteria |
Replicon accession | NC_013530 |
Strand | - |
Start bp | 1329921 |
End bp | 1331363 |
Gene Length | 1443 bp |
Protein Length | 480 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | HipA N-terminal domain protein |
Protein accession | YP_003325813 |
Protein GI | 269956024 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.581012 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCAGCA CGTTGGCAGT CCTGCTCTCC GGCCGCCTGA TCGGACAGGT CGAAAGAACC CGCGCCGGAG TCCTGCGCCT GACATACCTA CCGGAGGCTT CTACCCCGGG CGCCACGCCG CTATCGCTGT CATTGCCGCC CACCGAGCAG TCCATCACCG GCCCTCGGGT CCAGTCGTTC CTCGACGGAC TCCTCCCCGA CAACTCCCGC GTGCGCCAGT CCATCGCACA GGTCCACGGC GCCGACGCCT CCGATCCGTT GAGCCTGCTG GCAGCCATCG GCAAGGACTG CGCAGGCGCT GTCCAGTTCT GCCCGCCCGA CCAGGTTGAG CAGGCCCTTG CTCGCACCGG TGACCTCGTG CCGGTCCGCG ACTCGGACAT CGAGATGCGG TTGGCCGAGA TTCGCATGGA TCAGGACGCC AGCTGGACGA TGTCCGAAGA GCACTGGTCC CTGGGCGGAG GTCAGCAAAA GTTCGCTCTA CGCCGCACTG ACGACGGCTG GGCTGAGGCA CGCGGAACTC AGCCCACCAG CCACATCTTC AAGCCTGGCA TCTATAAGTT GCGTGCCCAG GCGTTGGTCG AGCACATCTC CATGCGGGCT GCCCGCGCCA TCGGACTCGA CGTCGCCCAC ACCGAGTACA CATCCTTCAA ATCCGAGGAC GCGCTCGTCA TCACGAGATT TGACCGCGTC GCATCCCCAG ATGGCACCCT TGCGCGAGTC CACCAAGAGG ACGCCTGTCA AGCGTTAGGT GTGGTCGAGA AGTACGAACA GCACGGAGGT CCGAGGGTCG AAGACGTTGT CACCCTCCTT CGCCAGAACT CCCACACCGC AGCGGTAGGC CGCCGAAACG TATATCGGTT CATCGACGGG ATCATCCTGA ACACGGTCAT CGCGGCGCCC GACGGCCACG CCCGCAACTA CGCACTGTTG CTCGACGGCG ACCAGGTGAG CCTGGCTCCA TTGTTTGATG TCGCCTCCGG GCTGGCGTAC AGCAACCCGT CCAATCGAGT CACAGCGATG AGCGTTGCAG GCAACTTCTA CCCCGAGACG GTGACACGAG ACGACTGGGC GCGTCTGGCT GAACGCAACC GACTCGACGA GGCCGCCCTC ATCGACCGCG TGAACGAGGT TGCCGACCAG ATCCCCGATG CGATGCGCGA TGCGCTGGAC GAGATCGACG ACTGGGACGG TCAGTCCAGC GAACTGGCGA AGCGGCTACT GCCCGCCATG CAGGAGCACG CAACCAGAGT TGCCCAGCGG ATGCGCTCCG AATCAACACC GCGAGAGCCC GTGGCCCCGC CCATCCCGAA CGACGGGCTG GATTACGGGT CCGCCCAACG AAGCCACAAC GGACCTGCGA CCGCGACCCG CCCGTACACC AAGAAAGACG GTACGCGCGT CAAGGGATCC AGGAGAACTC CGGGGCAGAA CCGGGGGAAC TAG
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Protein sequence | MTSTLAVLLS GRLIGQVERT RAGVLRLTYL PEASTPGATP LSLSLPPTEQ SITGPRVQSF LDGLLPDNSR VRQSIAQVHG ADASDPLSLL AAIGKDCAGA VQFCPPDQVE QALARTGDLV PVRDSDIEMR LAEIRMDQDA SWTMSEEHWS LGGGQQKFAL RRTDDGWAEA RGTQPTSHIF KPGIYKLRAQ ALVEHISMRA ARAIGLDVAH TEYTSFKSED ALVITRFDRV ASPDGTLARV HQEDACQALG VVEKYEQHGG PRVEDVVTLL RQNSHTAAVG RRNVYRFIDG IILNTVIAAP DGHARNYALL LDGDQVSLAP LFDVASGLAY SNPSNRVTAM SVAGNFYPET VTRDDWARLA ERNRLDEAAL IDRVNEVADQ IPDAMRDALD EIDDWDGQSS ELAKRLLPAM QEHATRVAQR MRSESTPREP VAPPIPNDGL DYGSAQRSHN GPATATRPYT KKDGTRVKGS RRTPGQNRGN
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