| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_1211 |
|---|
| Symbol | |
|---|
| ID | 8648729 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | + |
|---|
| Start bp | 1314464 |
|---|
| End bp | 1317319 |
|---|
| Gene Length | 2856 bp |
|---|
| Protein Length | 951 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | translation initiation factor IF-2 |
|---|
| Protein accession | YP_003325800 |
|---|
| Protein GI | 269956011 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.186812 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCGAAGG TCCGCGTGCA CGAGCTTGCC AAAGAGCTCG GCGTGACGAG CAAGGCCCTG
CTGGACGATC TGAAGGCCGC CGGAGAGTTT GTCCGGTCGG CGTCCTCGAC GCTCGAGGCG
CCGGTCGAGC GCATGATCCG CGAGAAGCAC AAGAGCACCG CTGCGCCGGC CCCTGCGGCC
GCGCCGGCCG CTCCTGCGCG GAAGGCTGCC GCCCCCGCGG CGCCGACCCC GGCCCGTCCG
GCTCCCGCCC CCCAGGCTGC GACCCCCGAG GCTCCGGCCC CGGCGGCTCC CGCTGCCCCC
GCACCCGCCC CGGCTCCGGC CGCGCAGGAG GCTCCGGCCC GCCCGGCGCA GCCGCGCCCT
GCCGGCGCCC CCGGCCCGCG TCCGGGCGCC CCGCGTCCCG CCGCCGGCGG GGACCGTGGT
GCCCGCCCCG GTGCTGCGCG CCCGGGCAAC AACCCGTTCG CCCCCTCGCA GGGCATGCCG
CGTCAGGGCG CTCGCCCCGG CTCCGGTGAG CGCTCCCCGC GTCCGGGCAA CAACCCCTTC
GCCACGAGCC AGGGGATGCC GCGTCCGGGT CAGCGCCCGG AGCGCAACGA CAACGCGCCC
GCGGCCTCGG CCGGCGAGCG TCCGGGCGGT CCCCGTCCGG GCGGCCCTCG TCCCGGTGGC
CCGCGTCCGG CGGCGCCCCG TCCCGGCGGT GGCGCGCGTC CGAACCCGGG CATGATGCCC
GGCCGTACGT CCATGCCGCG TCCGGGCGAG CGCCCGGCAC CCGGCGGTGC GGGCGGCGGT
GGCGGCCGCG GTCGTCCCGG TGGCGGCGGC GGGTACGCCG GTCGCCCCGG CGGTGGCGGC
CCCGGTGGCG CACCCGGTGG TGGCGGCGGT TTCGCCGGTC GCCCCGGTGG CGGTGGCCGT
GGTGGCGCCG GTCGTGGTTC CACGCAGGGT GCGTTCGGCC GCGCAGGTGG CCGTCCCGTC
CGTGGGCGGA AGTCGAAGCG CGCGAAGCGG CAGGAGTTCG AGGCGATGCA GGCGCCGTCG
CTGGGCGGCG TGTCCGTCCC GCGCGGTTCG GGCGACACCG TCGTCCGCCT GCGTCAGGGT
GCCTCGCTCA ACGACTTCGC GGACAAGATC GACGCCAACC CCGCGTCGCT CGTGACCGTG
CTCTTCCACC TCGGTGAGAT GGCGACGGCG ACGCAGTCGC TCGACGAGGC CACCTTCGGT
GTGCTCGGCG AGGAGCTCGG CTACAAGATC GAGATGGTCT CGGCCGAGGA GGAGGACCGC
GAGCTGCTCG GGGCCTTCAG CATCGACCTG GACGCCGAGC TCGAGGCCGA GGGCGACGAG
GACCTGCAGC CGCGTCCGCC GGTCGTGACC GTCATGGGTC ACGTCGACCA CGGCAAGACC
AAGCTCCTCG ACGCCATCCG GTCCACGGAC GTCGTCGCGG GCGAGGCCGG TGGGATCACC
CAGCACATCG GTGCCTACCA GATCCGTACC GAGCACGAGG GCAACGAGCG TGCCATCACG
TTCATCGACA CCCCGGGTCA CGAGGCGTTC ACCGCCATGC GTGCTCGTGG TGCCCAGGTC
ACGGACATCG CGATCCTCGT GGTCGCGGCC GACGACGGCG TGATGCCTCA GACGATCGAG
GCGCTCAACC ACGCCCAGGC GGCCGGTGTG CCGATCGTGG TCGCGGTCAA CAAGGTCGAC
AAGGAGGCTG CGAACCCGGC GAAGATCCGC CAGCAGCTCA CCGAGTACAA CCTGGTGGCC
GAGGAGTACG GCGGCGACAC CATGTTCGTC GACGTCTCGG CGAAGAACCG GATGGGCATC
GACAGCCTCC TCGAGGCCGT CCTGCTCACC GCGGACGCGT CGCTCGACCT GCGTGCCAAC
CCGGACAAGG ACGCGCGCGG TGTCGCGATC GAGGCCAACC TCGACCGCGG TCGCGGTGCC
GTGGCCACGG TCCTGGTGCA GTCCGGCACG CTCGAGGTCG GCGACGCGAT CGTCGCTGGC
ACGGCCCACG GCCGCGTGCG TGCGATGTTC GACGAGCACG GCGAGTCCGT GACCGCCGCC
GAGCCGGCCC GCCCGGTCCA GGTGCTCGGT CTCTCGTCGG TGCCGAGCGC CGGTGACACC
TTCCTGGTGG CCCCGGACGA GCGCACCGCC CGTCAGATCG CCGAGAAGCG CGAGGCCGCC
GAGCGTGCCG CCCTCCTGGC CAAGCGCCGC AAGCGCATCA GCCTCGAGGA CTTCACCAAG
GCGCTCGAGC AGGGCAAGGT CGAGACCCTC AACCTCGTCA TCAAGGGTGA CGTGTCCGGT
GCCGTCGAGG CACTCGAGGA CGCGCTGCTC AAGATCGACG TCGGCGAGGA GGTGTCGCTC
AACGTCATCC ACCGCGGTGT CGGTGCCGTG ACGCAGAACG ACGTGAACCT GGCCACGGTC
GACTCGGCCG TGATCATCGG CTTCAACGTC AAGTTCGGCG AGCGCGTCGA GGAGCTGGCC
GACCGCGAGG GCGTCGAGGT CAAGTTCTAC TCGGTCATCT ACCAGGCGAT CGAGGACGTC
GAGTCGGCCC TCAAGGGCAT GCTCAAGCCG GAGTACGAGG AGGTCCAGCT CGGGACCGCG
GAGATCCGCC AGGTCTTCCG TTCCTCGAAG TTCGGCAACA TCGCCGGTTC GATCATCCGC
TCGGGCACCA TCCGACGGAA CTCGAAGGCG CGCGTCCTGC GCGGCGGAAA GGTCGTCGGG
GACAACCTCA CGATCGAGTC GCTGCGTCGC GAGAAGGACG ACGTCACCGA GGTCCGCGAG
GGCTTCGAGT GCGGTATCGG CCTCGGGTCG TATAACGACG TCACCGAGGG CGACATCATC
GAGACGTTCG AGATGCGCGA GAAGCCGCGT TCCTGA
|
|---|
| Protein sequence | MAKVRVHELA KELGVTSKAL LDDLKAAGEF VRSASSTLEA PVERMIREKH KSTAAPAPAA
APAAPARKAA APAAPTPARP APAPQAATPE APAPAAPAAP APAPAPAAQE APARPAQPRP
AGAPGPRPGA PRPAAGGDRG ARPGAARPGN NPFAPSQGMP RQGARPGSGE RSPRPGNNPF
ATSQGMPRPG QRPERNDNAP AASAGERPGG PRPGGPRPGG PRPAAPRPGG GARPNPGMMP
GRTSMPRPGE RPAPGGAGGG GGRGRPGGGG GYAGRPGGGG PGGAPGGGGG FAGRPGGGGR
GGAGRGSTQG AFGRAGGRPV RGRKSKRAKR QEFEAMQAPS LGGVSVPRGS GDTVVRLRQG
ASLNDFADKI DANPASLVTV LFHLGEMATA TQSLDEATFG VLGEELGYKI EMVSAEEEDR
ELLGAFSIDL DAELEAEGDE DLQPRPPVVT VMGHVDHGKT KLLDAIRSTD VVAGEAGGIT
QHIGAYQIRT EHEGNERAIT FIDTPGHEAF TAMRARGAQV TDIAILVVAA DDGVMPQTIE
ALNHAQAAGV PIVVAVNKVD KEAANPAKIR QQLTEYNLVA EEYGGDTMFV DVSAKNRMGI
DSLLEAVLLT ADASLDLRAN PDKDARGVAI EANLDRGRGA VATVLVQSGT LEVGDAIVAG
TAHGRVRAMF DEHGESVTAA EPARPVQVLG LSSVPSAGDT FLVAPDERTA RQIAEKREAA
ERAALLAKRR KRISLEDFTK ALEQGKVETL NLVIKGDVSG AVEALEDALL KIDVGEEVSL
NVIHRGVGAV TQNDVNLATV DSAVIIGFNV KFGERVEELA DREGVEVKFY SVIYQAIEDV
ESALKGMLKP EYEEVQLGTA EIRQVFRSSK FGNIAGSIIR SGTIRRNSKA RVLRGGKVVG
DNLTIESLRR EKDDVTEVRE GFECGIGLGS YNDVTEGDII ETFEMREKPR S
|
|---|
| |