| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_1161 |
|---|
| Symbol | |
|---|
| ID | 8648679 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | + |
|---|
| Start bp | 1257174 |
|---|
| End bp | 1258340 |
|---|
| Gene Length | 1167 bp |
|---|
| Protein Length | 388 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | |
|---|
| Product | signal recognition particle-docking protein FtsY |
|---|
| Protein accession | YP_003325750 |
|---|
| Protein GI | 269955961 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.273828 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCGACG TCCTGCCCTG GCTCATCCCG CTCCTCGCCG TCGTCGTCCT CGGGACCGTC
GCGGCCTTCC TGGTCCCGCG CGCCCGCCGC GGCGCGCAGC TCCCGCCGCC GGTCGACCCC
GGCGCCCTCA TGGACCTCGC CGAACCCCCG GTGGTCGAGC CCCCGCTGGT CGAGCCTGTC
GAAACCACCG AACCCCCGGT GGTCGAGCCT GTCGAGACCC CCGAGCTGGA GCGCCCCGCG
CCCACCGCCG GCCGTCTGGT GCGCCTGCGC GACCGGCTGG CGCGCTCCGG GTCGCCGCTG
GGCGCACGTC TGCTGGCGGT CCTCTCGCGC GACCACCTCA CCGAGGACGA CTGGGACGAG
CTGGAGGAGA CCCTGCTGCT CGCCGACGTC GGCGCCGGCC CGGCGGGCGA GCTCATCGAG
GCCCTGCGCA CGCGGGTGCG CGTGGAGGGC GTCGGCGACC CGGCGGCCGT GCGGGCGATG
CTCCGCGACG AGCTGGTCAC GCTCGTCGGC CCCGACCTCG ACCGCACCCT GCACACGCAG
GGGGCCGAGC CGGGCACGCC GGGCGTGGTG CTGGTGGTCG GTGTCAACGG CACGGGCAAG
ACGACGACGG TGGGCAAGCT GGCCCGCGTG CTCGTCGCCG ACGGCAGGCA GGTCGTGCTG
GGTGCGGCCG ACACCTTCCG CGCCGCCGCC GCCGACCAGC TCCAGACGTG GGGCTCGCGC
GTCGGCGTCC CCACCGTCCG CGCCGACCGG GACGGCGCCG ACCCCGCCGC GGTCGCGTTC
GACGCCGTGC GCGAGGGCCG GTCCGACGGC GCCGACGTCG TCCTGGTGGA CACCGCCGGG
CGCCTGCAGA ACAAGGCCGG GCTGATGGAC GAGCTCGGCA AGATCACCCG CGTCATCACG
CGGGAGGCCG CGCTGACCGA GGTGCTGCTC GTGCTGGACG CGACGACGGG GCAGAACGGG
CTGCAGCAGG CCCGCGTGTT CGGCGAGGTC GCGGGCGTCA CGGGCATCGT GCTGACCAAG
CTCGACGGCA CCGCCAAGGG CGGCATCGTC GTCGCCGTCC AGCGCGAGCT GGGGGTCCCG
GTCAAGCTCG TCGGCCTCGG CGAAGGGCCG GACGACCTGG CGCCGTTCGA CGCCGAGCAG
TTCGTCGACG GCATCCTCGG CGGCTGA
|
|---|
| Protein sequence | MTDVLPWLIP LLAVVVLGTV AAFLVPRARR GAQLPPPVDP GALMDLAEPP VVEPPLVEPV
ETTEPPVVEP VETPELERPA PTAGRLVRLR DRLARSGSPL GARLLAVLSR DHLTEDDWDE
LEETLLLADV GAGPAGELIE ALRTRVRVEG VGDPAAVRAM LRDELVTLVG PDLDRTLHTQ
GAEPGTPGVV LVVGVNGTGK TTTVGKLARV LVADGRQVVL GAADTFRAAA ADQLQTWGSR
VGVPTVRADR DGADPAAVAF DAVREGRSDG ADVVLVDTAG RLQNKAGLMD ELGKITRVIT
REAALTEVLL VLDATTGQNG LQQARVFGEV AGVTGIVLTK LDGTAKGGIV VAVQRELGVP
VKLVGLGEGP DDLAPFDAEQ FVDGILGG
|
|---|
| |