| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_1151 |
|---|
| Symbol | |
|---|
| ID | 8648669 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | - |
|---|
| Start bp | 1242625 |
|---|
| End bp | 1243719 |
|---|
| Gene Length | 1095 bp |
|---|
| Protein Length | 364 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, LacI family |
|---|
| Protein accession | YP_003325740 |
|---|
| Protein GI | 269955951 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.274702 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGTGTGA TCGTGACCAC ATTCAGCCGC ATCGGGACCT CTCCCGCACC CGGCTCCCGA
CGCATCACGA TCACCGACGT CGCGCGCACG GCGGGCGTCT CGATCGCCGT CGTCTCCTAC
GCGCTGAACG GGCGCCCCGG GGTGTCCGAC CGCACCCGGA GGCACGTGCT GCGCACGGCG
GCCGACCTGG GATGGCGGCC CAGCGCCGCC GCCCGCTCCC TGCGTTCGGT GCCGCGCAGC
GTCTCGGTCC AGGCCGTCGG CGTCGCGGCC GCGGCCCGCA CCACCGCCGT CGCGCTCGGT
CTGCGGGCCG CGCTCGACGA CGCCGAGGCG ACGCCCGCCA CCGACGTCGT CGTGGACGTC
GCCCCCGACC ACGACGTCGG GGCCCGGGAC CTCGAGCACG CGTGGACCGA GCGGCGGCAC
GGGGCGTTCG TCGTGACGGG CCTGCACCGG GACGACCCGC GCACGCGGCT CGTCGCGGAC
CACGGCGTCC CGCTCGTACC GCTCGTGCCC CAGCAGCGGG GCGGCATGCT CGGCACCGCG
CCCGGATCGG TCCCAGGGCT CGTCTGGTTC TCCGGGGACG CCGAGGAGCG CGCGGCCCGC
TACCTGCGCG AGCTCGGGCA CCGCCGCGTC GCGCTCCTGG TGCAGGACGG TCACGACGAC
CCGTCGCGCC TGCTCCTCGA CGCCCTCGCG GGGGCGGGCG ACGGCGCGCA CGTCGTCACC
GAGGAGATCG TCTACCGGAC CGAGGAGGAC GCCGCGGCGC GCGCCGCGCG GCTCCTGGCC
ACGGCGAACC GGCCCACCGC CGTCGTCGCC GACGGGGACG TCGCCCTGCT CGCCGTCCTC
GAGGCCGCCC GGCAGCGTGG CCTGGAGGTG CCGTGGGACC TGTCCGTCCT GGCCCTCGAG
GACTCCCCGG CGTGCCGGCT CGTGCACCCG CCGGCCACCG CGGTGGCGCG CTCCTGGGCC
GAGCTCGGTG CCGCGGCTGC CGTGCTCGTG CGCCCCCTGC TCGGCGGGCA GCCGCCACGG
GACGACGACG ACGACGCACC CGCCGCCGCG GCGCGCCTCG TCATCCGGGG TTCGACGGCC
CCGGTCCCCG CCTAA
|
|---|
| Protein sequence | MCVIVTTFSR IGTSPAPGSR RITITDVART AGVSIAVVSY ALNGRPGVSD RTRRHVLRTA
ADLGWRPSAA ARSLRSVPRS VSVQAVGVAA AARTTAVALG LRAALDDAEA TPATDVVVDV
APDHDVGARD LEHAWTERRH GAFVVTGLHR DDPRTRLVAD HGVPLVPLVP QQRGGMLGTA
PGSVPGLVWF SGDAEERAAR YLRELGHRRV ALLVQDGHDD PSRLLLDALA GAGDGAHVVT
EEIVYRTEED AAARAARLLA TANRPTAVVA DGDVALLAVL EAARQRGLEV PWDLSVLALE
DSPACRLVHP PATAVARSWA ELGAAAAVLV RPLLGGQPPR DDDDDAPAAA ARLVIRGSTA
PVPA
|
|---|
| |