Gene Xcel_1136 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXcel_1136 
Symbol 
ID8648654 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylanimonas cellulosilytica DSM 15894 
KingdomBacteria 
Replicon accessionNC_013530 
Strand
Start bp1223948 
End bp1224874 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content74% 
IMG OID 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003325725 
Protein GI269955936 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0101112 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCGCG TCGAGCAGTT CGAGGAGCAC CGCCGCCTGC TGTTCTCGAT CGCCTACCGG 
CTGCTCGGCA GCGTCGGCGA GGCCGAGGAC GCCGTGCAGG AGACGTGGCT GCGGTGGGAC
GCGTCGGGCG TGGAACCGGC GTCCCCGCGG GCGTACCTGT CGACCATCGT CACGCGGGTG
GCCCTCGACG TGCTCCGGTC GGCGCGCGTG CGCCGTGAGC AGTACCCGGG CCCGTGGTTC
CCCGAGCCGC TGCTCGAGGA CCCCTACGAG GAGCCCGAGC GCGCGGCCGA GCTCGCCGAC
TCCCTGTCCA CCGCCGCGCT CCTGCTCCTC GAACGGCTGA GCCCGCTCGA ACGCGCGGTG
TTCGTGCTGC ACGACGTCTT CGGCTTCGGG TTCGACGACG TCGCCGACAC GGTCGGGCGC
ACCGAGGCCG CCTGCCGCCA GCTCGCGTCG CGGGCCCGGC GCCACATGGC CGAGGGCAGG
CCCCGGTTCG AGGCCGACCG GCACGCGAGC GCCGCGCTCG CCGCCCGCTT CTTCGATGCG
CTGCGGCTCG GCGACGTCGA CGCCCTGCGC GAGGTGCTGG CGGCCGACGT CCAGATGGTC
GCGGACGGGG GCGGCAAGGG CGTGCTCTTC GGCAAGGGCC GCTTCTACGG CCTCGATGCG
GTCGCGCGGG TGCTCGCCGC GATGGTCGAG CTGTTCGGGG CGGTCGGCGG CACGTTCCGC
GTCGAGGAGA TCAACGGCGG CCCGGGCGCG GTGCTCACGG ACGCGGCGGG CCGTGTCGGC
GGGGCGATAT CGCTGGAGAT CGCCGACGGG CAGATCCAGG CCATCCGGTC GGTGACCAAT
CCCGACAAGC TCGGCCACCT GGGACCGGTG CTGGAGGACG GGCAGGCGTA CCTGCACGAG
GCGATGCGCC GTCGCCGGGA GGGCTGA
 
Protein sequence
MTRVEQFEEH RRLLFSIAYR LLGSVGEAED AVQETWLRWD ASGVEPASPR AYLSTIVTRV 
ALDVLRSARV RREQYPGPWF PEPLLEDPYE EPERAAELAD SLSTAALLLL ERLSPLERAV
FVLHDVFGFG FDDVADTVGR TEAACRQLAS RARRHMAEGR PRFEADRHAS AALAARFFDA
LRLGDVDALR EVLAADVQMV ADGGGKGVLF GKGRFYGLDA VARVLAAMVE LFGAVGGTFR
VEEINGGPGA VLTDAAGRVG GAISLEIADG QIQAIRSVTN PDKLGHLGPV LEDGQAYLHE
AMRRRREG