Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xcel_1106 |
Symbol | |
ID | 8648622 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylanimonas cellulosilytica DSM 15894 |
Kingdom | Bacteria |
Replicon accession | NC_013530 |
Strand | + |
Start bp | 1192377 |
End bp | 1193573 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | |
Product | DNA glycosylase/AP lyase, H2TH DNA-binding protein |
Protein accession | YP_003325695 |
Protein GI | 269955906 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.804978 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCCGAGG GTCACACCGT CCATCGCCTC GCGCGGACGT TCGCCGAGCT GTTCGGCGGG CAGGCGCTCG CCGTGACCAG CCCTCAGGGG CGGTTCGCGG CGGGCGCCGC GCTCGTGTCC GGCCGCGTCC TCGTGGCGAG CGAGGCCTGG GGCAAGCAGC TCTTCCTGGG CTTCGCCGCC GCGAGCCCTC CGGTGGTTGA GCCGCCCCCG GTGGTTGAGC CGCCCTCGGT GGTTGAGCCG CCCCCGGTGG TTGAGCCTGT CGAAACCACC CCGCGCCGGA ACGTGGTTTC GACAGGCTCA ACCACCGGAG GGGTTTCGAC AGGCTCCACC ACCGATACCG CCGACGTGCT CTGGCTCCGC GTCCACCTGG GCCTCTACGG TGCCTGGACC TTCACGACGG ACGGCACGTC GACGGCCGCG CACGCGATCG GCGCCCCGCG CAGGCGCGTC GGCGAGACCG AGACCACCCC CGCCGACCTG TCAGACCCAC GCAGGTCCCC GGGCTTGCCA GGGTCTGACA ACAGTGTGGG CGAGTGGGTG GTGCCGCCGC CGCGTGGGGC CGTGCGGGCG CGCCTGCTCG GCGCCCACGC CGTCGCCGAC CTCACCGGCC CCACGGCGTG CGAGGTGATC ACCCCCGCCG ACAAGGTCGC GGTCGAGCAG CGGCTCGGCC CCGACCCCAT CCGGCCCGAC GGCGGTCACG GCTCGCTGGC GAAGGCGCGC GACGTGTTCG TCACCCGGGT GTGCCGCTCG CGCGTCACCG TCGGCCAGCA GCTCATGGAA CAGTCTGTCG TCGCAGGCGT AGGGAACATC TTCCGGGCGG AGGCGCTGTT CCGCGCCGGG CTGGACCCCC TGCGGCCGGG CCGCGACGTC GACCCCGCCG TGCTCGGCGC CATCTGGGAC GACCTGGTCG ACCTCATGCA CGACGGCGTC CGGCGCGGCG CGATCGTCAC CACCCGGCCG GCCGACCGCG GCCACGACGC GCCCGGCATC CGCGCCGCCG GTGGCGCGGC CGCCCTGGGC GCCACCACCC GCAGGCACGA GCGCCGCGCC CCGGTGCCGC CCGGCGCCGT CCCGCGCGAG GAGTCGTTCT ACGTCTACCA GCGCGACGGT CTTCCCTGCC GCCTCTGCGG TGCCCCGGTG CTGGTCAAGG ACCTCGCCGG GCGGGCGCTG TACTGGTGCC CCGTCTGCCA GTCCTGA
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Protein sequence | MPEGHTVHRL ARTFAELFGG QALAVTSPQG RFAAGAALVS GRVLVASEAW GKQLFLGFAA ASPPVVEPPP VVEPPSVVEP PPVVEPVETT PRRNVVSTGS TTGGVSTGST TDTADVLWLR VHLGLYGAWT FTTDGTSTAA HAIGAPRRRV GETETTPADL SDPRRSPGLP GSDNSVGEWV VPPPRGAVRA RLLGAHAVAD LTGPTACEVI TPADKVAVEQ RLGPDPIRPD GGHGSLAKAR DVFVTRVCRS RVTVGQQLME QSVVAGVGNI FRAEALFRAG LDPLRPGRDV DPAVLGAIWD DLVDLMHDGV RRGAIVTTRP ADRGHDAPGI RAAGGAAALG ATTRRHERRA PVPPGAVPRE ESFYVYQRDG LPCRLCGAPV LVKDLAGRAL YWCPVCQS
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