Gene Xcel_1101 details

Gene Information

• Locus tag: Xcel_1101
• ID: 8648617
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xylanimonas cellulosilytica DSM 15894
• Kingdom: Bacteria
• Replicon accession: NC_013530
• Strand: +
• Start bp: 1183295
• End bp: 1185448
• Gene Length: 2154 bp
• Protein Length: 717 aa
• Translation table: 11
• GC content: 74%
• Product: 4-alpha-glucanotransferase
• Protein accession: YP_003325690
• Protein GI: 269955901

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.00817417
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACCCAGA CGACGCCGCC CGACGAGATT CCCGCCGAGC TCCGGGAGCT CTCGCACGTG 
CACGGGGTGC GCACCGAGTT CTACGGCTTC GACGGCACGC CGGTCCAGGT GCGCGCCTCG 
ACGCTCGTCG CGGTCCTGGA GGCGCTCGGC GTCCCCGCGA CCACGCGCAA CCAGGTCCAG 
ATGTCCCTCG CGCTCGCCCG CGACGACGAG TGGCGCCAGG CGCTGCCGCC CACCGTCGTC 
GTCCGCCAGG GCATCGACGC CACCGTGCCC GTCCACGTCA CCGACGGCTC CACGGTCCAG 
GTCTGGGTCG AGCTCGACGG CGCGGAGCCG CTCGCGGCGC GGCGCGGCCA TCGCGAGCGC 
CGCGACCTGC CGCAGGTCGA GCACTACGTC GAGCCGCGCA TGGTGGACGG GCGCCGCATC 
GGGCGCGCGA CCTTCGCCGT CCCGGCCGAC CTGCCGCTCG GCTGGCACAC GCTGCACGCC 
ACGTCCGACG GCGCGGAGGC GAAGACCACC CTCGTCGTGA CGCCGCAGCG CCTCACGCTG 
CCGCCCGCCG TCGAGCAGGG GCAGGTCTGG GGGCTGCTGG TGCAGCTCTA CTCGGTGCGC 
TCGCGCACCT CGTGGGGGCT GGGCGACCTC GCCGACCTCG CCGACATCGC CTGGCTGGCC 
GCGCACCGTG GCGGCGCCGA CTTCGTCGCG ATCAACCCGC TCGCGGCCGC CGAGCCCACG 
GTGCCGATGA CGCCGTCGCC CTACCTGCCC ACCTCGCGCC GGTTCCTCAA CCCGATCTAC 
GTGCGCGTCG AGGACATCCT GGAGACGGCG TACCTCTCGG CCGCCGACCG CTCGCTGGTC 
GAGTGGGCCG CCGAGCCGGT GCGTGACCGG GCCACGGACC CGGGCCCCAT CGACCGCGAC 
GCCGTCTGGG AGGCCAAGAA GGCCGCCCTC GAGGTCGTGT TCACGGCCCC GCGGCGTGCC 
GCCCGTCAGG CCGCCTACGA GGAGTTCGTC ACCGAGCAGG GCGCCGGCCT GCGCGACTTC 
GCCACCTGGT GCGCGATCAC CGAGCACCTG GCCGGCAAGG ACTGGCCGCG CGAGCTGTCC 
ACCCCGGACG CGCCCGCCGT GCGCGCGCTG CGCGAGCGGC TGCGCGAGCG CGTCGAGTTC 
CACATGTGGT TGCAGTGGGT GGCAGACGAG CAGAAGACGG TCGCGCAGCG GACGGCGCGT 
GAGGCCGGGA TGAAGATCGG CATCATGCAC GACCTCGCCG TCGGCGTGCA CCCCGAGGGT 
GCCGACGCGT GGGCGAACGG CGCCTACCTG GCCCGCGGCG TCGAGGTCGG CGCCCCGCCG 
GACATGTACA ACCAGCAGGG GCAGAACTGG TCGCAGCCGC CGTGGAACCC CCGCGCGCTC 
GCCAAGGCCG GGTACGCCCC CTACCGCGAC ATGCTGCGCA CGGTGCTGCG CTCCGCGGGC 
GCGCTGCGCG CCGACCACAT CCTCGGCCTG TTCCGGCTGT GGTGGATCCC GGGCGGCTCG 
AAGGCGTCCG CCGGCACGTA CGTCGCGTAC GACCACGAGG CGATGGTGGG CATCCTGTGC 
CTGGAGGCGC ACCGGGCCGG CGCCGTCGTC GTCGGCGAGG ACCTGGGCGT GTTCGAGCCG 
TGGGTGCGCG ACTACCTCGC CGACCGCGGC ATCCTCGGCA CGTCGGTCAT GTGGTTCGAG 
CAGGAGAACG GCGGGCCGCT GCCCCCCGAG AAGTACCGGC ACCTGACCAT GGCGTCCGTG 
GGCACGCACG ACATGCCGCC GACCGCCGGG TACCTCGCCG GCGAGCACGT GGACCTGCGC 
GAGCGGCTCG GGCTGCTCAC CGAGCCGGTC GAGGTCGTCC GCCGCCGTGC CCGCGCCGAG 
CGCGAGGTCT TCGTGCGGGT ACTGGTCGAG CGTGGGCTCG TGCGCGAGGA CGCCTCGGAG 
CGCGAGATCG TCGAGGCCAT GCACCGGTAC CTGCGCCAGA CGCCGTCGGC GCTGTTCGGC 
GTCCAGCTCG TCGACATGGT GGGGGAGCGG CGGTCGCAGA ACCAGCCCGG CACCGACCAG 
GAGTACCCGA ACTGGAAGGT GCCGCTGGGC GACGCTAACG GCAACCCGAT CCTCCTGGAG 
GACCTCTTCG ACAGCCAGCG CCTGCGCAGC CTCATCGAGG CGCTGAACGC CTGA 

 

Protein sequence

MTQTTPPDEI PAELRELSHV HGVRTEFYGF DGTPVQVRAS TLVAVLEALG VPATTRNQVQ 
MSLALARDDE WRQALPPTVV VRQGIDATVP VHVTDGSTVQ VWVELDGAEP LAARRGHRER 
RDLPQVEHYV EPRMVDGRRI GRATFAVPAD LPLGWHTLHA TSDGAEAKTT LVVTPQRLTL 
PPAVEQGQVW GLLVQLYSVR SRTSWGLGDL ADLADIAWLA AHRGGADFVA INPLAAAEPT 
VPMTPSPYLP TSRRFLNPIY VRVEDILETA YLSAADRSLV EWAAEPVRDR ATDPGPIDRD 
AVWEAKKAAL EVVFTAPRRA ARQAAYEEFV TEQGAGLRDF ATWCAITEHL AGKDWPRELS 
TPDAPAVRAL RERLRERVEF HMWLQWVADE QKTVAQRTAR EAGMKIGIMH DLAVGVHPEG 
ADAWANGAYL ARGVEVGAPP DMYNQQGQNW SQPPWNPRAL AKAGYAPYRD MLRTVLRSAG 
ALRADHILGL FRLWWIPGGS KASAGTYVAY DHEAMVGILC LEAHRAGAVV VGEDLGVFEP 
WVRDYLADRG ILGTSVMWFE QENGGPLPPE KYRHLTMASV GTHDMPPTAG YLAGEHVDLR 
ERLGLLTEPV EVVRRRARAE REVFVRVLVE RGLVREDASE REIVEAMHRY LRQTPSALFG 
VQLVDMVGER RSQNQPGTDQ EYPNWKVPLG DANGNPILLE DLFDSQRLRS LIEALNA