| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_1100 |
|---|
| Symbol | |
|---|
| ID | 8648616 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | - |
|---|
| Start bp | 1182133 |
|---|
| End bp | 1183158 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | MscS Mechanosensitive ion channel |
|---|
| Protein accession | YP_003325689 |
|---|
| Protein GI | 269955900 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0753115 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACGGACC TCGCCTCGAT CCCCCTGACC CTCGCCCGCC TCGGCTCCAC GACCCCGGAC
CCGGGCTCGA CGCCCGAGAT CGTCCGCCTC GGCGAGGAGA AGGCCTCCGC GTTCTGGGAG
TGGTTCACCG GCTGGCCGCT GCAGGTGCTC ATCGTGCTCG CCGTCGGGCT GATCGTGCTC
GCGCTGGTGC GCCGCCTCAT CGGGCACGTG ACCGAGCGCA TCGCCAACGG GTACCACCGC
GCCTACGTGC TGGCGGAGGA GGCCGGCGGG GCGGAGGGCA AGCGCGTGCG CGCGCGCAAG
ATCCTCGTCG AGGACACGCT CGGCCTGGTC AGCCCCGAGG TCAAGCAGCG GCGGTCGCGG
CGCGCCCGCA CGGTCGGGTC GGTGCTGACC TCGGCCGCGA CCATCGTCAT CATGACCGCG
ATGGCGCTGT TCATCCTGGG CGCCGTCGGT GCGGAGAAGA TCGTCGGGTA CCTCGTGGGC
ACGGCGGGCG TCGTCGCCGT CGCGGTCGGT TTCGGCGCCC AGTCCCTCGT CCGCGACTTC
CTGTCGGGCC TGTTCATCCT CATCGAGGAC CAGTACGGCG TCGGCGACGA GGTCGACCTC
GGGGCGGGCG CCGTCGGCGT CGTCGAGAAG ATGGACCTGC GGCTGACGCA CGTGCGCAGC
TTCGACGGCA CCCTGTGGCA CGTGCGCAAC GGCGAGATCC TGCGCGCCGG CAACCACACC
CAGCAGTGGG CGCGGGCGGT GGCGGAGATC AAGGTGCCCG TGGGCTCGGA CATCGCCACG
GTGCGGGCGG CGCTGGGCCG CGCCGTCGAC ATCGTGCAGT CCGACGACAC GCTGGCGGGC
GATCTGCTGG AGACCCCGAG CGTGCGGGGC GTCGACGCCA TCACCGAGGG CTCCTACACG
TTCACGATGC ACACCCGGGT GCGGCCGGGC ACGGACGGCG AGGTGATGCG TGCGCTGCTC
GTGGCCGCCT ACGCGCAGCT CCGCGACGCG GGGATCATCG TGACCACGGC CGCCCCCGAC
GCCTGA
|
|---|
| Protein sequence | MTDLASIPLT LARLGSTTPD PGSTPEIVRL GEEKASAFWE WFTGWPLQVL IVLAVGLIVL
ALVRRLIGHV TERIANGYHR AYVLAEEAGG AEGKRVRARK ILVEDTLGLV SPEVKQRRSR
RARTVGSVLT SAATIVIMTA MALFILGAVG AEKIVGYLVG TAGVVAVAVG FGAQSLVRDF
LSGLFILIED QYGVGDEVDL GAGAVGVVEK MDLRLTHVRS FDGTLWHVRN GEILRAGNHT
QQWARAVAEI KVPVGSDIAT VRAALGRAVD IVQSDDTLAG DLLETPSVRG VDAITEGSYT
FTMHTRVRPG TDGEVMRALL VAAYAQLRDA GIIVTTAAPD A
|
|---|
| |