| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_1096 |
|---|
| Symbol | |
|---|
| ID | 8648612 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | - |
|---|
| Start bp | 1179413 |
|---|
| End bp | 1180393 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | |
|---|
| Product | putative viral-like DNA topoisomerase |
|---|
| Protein accession | YP_003325685 |
|---|
| Protein GI | 269955896 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.273828 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCGCC TGCGTCGTGT GTCCGCCTCG GCCCCCGGGT TCGGGCGGCG GCGTGCGGGG
CGCGGCTGGG TGTATCTCGA CGTCGACGGC GTGCCGTTGC GGGACGAGGC CGCGCTCGCC
CGCTGCCGTC GGCTGGCGAT CCCGCCCGCG TGGCGCGAGG TGTGGATCTG CCGGTACCCG
GACGGTCACC TGCAGGCGTT CGGCCGTGAC GACGCCGGAC GCGGCCAGTA CCTGTACCAC
GAGGAGTGGA CGCAGCGACG ACGACGACGC AAGCACGACC ACGTGCTGGA GGTTGCGGCG
CGGTTGCCTG CGGCCCGGCG CCGCGTGGCC CGGGCGCTCG CCGAGCCGGG CCTCGGCCCT
CTGAGGGTGG CGGCGCTGGC CTTCCGGCTG CTCGACCTGG CGTACTTCCG TGCGGGCGGC
GAGATCTACG CGACGAAGCA CCGCAGCTTC GGCCTGGCGA CCATCCGCAA GGAGCACGTG
GTCGTGGGTG CGGAAGGGAC CGTCCGCTTC CGGTACCCGG CCAAGAGCGG CCAGATCCGC
GAGGTCGAGG TCGACGATCC CGTGGTGGCC GAGCTGGTCG CTGCGATGAA GCGTCGGCGG
GGCGGCACGG ACCTGCTCGC GTGGCGCAAC GGCGACGGGT CGTGGCACGA CGTCACGAGC
GCGGACGTGC AGGCCGCCGT CAAGGAGCAG CTCGGCCCGG AGGCGACGCC CAAGGACTTC
CGCACCTGGC ACGCGACGGT GCTCGCGGCG CGCGCGCTCG CGGACGCGGG ACTGCCGCCG
CGCTCGGACC GCGCACGCCG GCACGTGGTG GCCGGTGTGG TGCGCGACGT CGCCGAGGAG
CTCGGCAACA CCCCGGCGGT GGCGCGGGCG TCGTACATCG ACCCGCGGCT GGTGGACCTG
TGGGAGCACG GCGAGACGAT CGGCCCGACC CGCACCCACG CGGCGGCGGA GCGCGCGGTG
CTGCGGCTGC TGGGTGGGTG A
|
|---|
| Protein sequence | MPRLRRVSAS APGFGRRRAG RGWVYLDVDG VPLRDEAALA RCRRLAIPPA WREVWICRYP
DGHLQAFGRD DAGRGQYLYH EEWTQRRRRR KHDHVLEVAA RLPAARRRVA RALAEPGLGP
LRVAALAFRL LDLAYFRAGG EIYATKHRSF GLATIRKEHV VVGAEGTVRF RYPAKSGQIR
EVEVDDPVVA ELVAAMKRRR GGTDLLAWRN GDGSWHDVTS ADVQAAVKEQ LGPEATPKDF
RTWHATVLAA RALADAGLPP RSDRARRHVV AGVVRDVAEE LGNTPAVARA SYIDPRLVDL
WEHGETIGPT RTHAAAERAV LRLLGG
|
|---|
| |