| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_1071 |
|---|
| Symbol | |
|---|
| ID | 8648584 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | + |
|---|
| Start bp | 1150150 |
|---|
| End bp | 1152351 |
|---|
| Gene Length | 2202 bp |
|---|
| Protein Length | 733 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | ABC transporter related protein |
|---|
| Protein accession | YP_003325660 |
|---|
| Protein GI | 269955871 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAGA AGAACCTGAG CGGCACGCAG GACGCCGTCG AGCCGGCGGT GCCGGACCAG
ACCCTGCAGC CTGCCGCGCC GCTCAGCCCG GCGGAGGCTC GGGCGGCGGC GAAGGCGGAG
GCCCGGAAGG CCAAGGCGGA GGCACGCAAG GCGAAGGCCG AGGCCCGGAA GGCCAAGTGG
GCCGCGATGG GCGCGGAGTC CACCGAGGGC CTGACCGAGG AGGAGAAGCT CGAGATCGAG
CTGGGTGAGG CCGCACGCCT CGCCTCCGAG TCCTGGGACG GCGTCGCACC GGGCAAGGCG
AAGAACTTCA AGGAGTCCTT CGGCCGGATG CTCGGCCTGC TGGCCCCCTA CAAGGTGGCC
CTCGTCGTCG TCACCCTCAT GGGCGCCGCC TCGGTGGTGC TGTCGGTATG GGCGCCGCGC
GTGCTCGGCC GGGCCACCGA CGTCATCTTC TCGGGCCTGT TCTCGCGCAG CTTCCCCCAG
GGCATGACGC AGGACCAGGC CGTCGAGGCG GTGCGCGCCG GGGGCCAGAA CCGCATCGCG
GACATGATCG CGGCGATGGA CCACTTCGTC CCGGGCGAGG GCATCGACTT CGACCTGCTG
CGCACCTTCA TGGTGACCGT GCTGGTCATC TACGTGTTCG CCGCGCTGCT CGGCTGGGCG
CAGGGCTTCA TCACGAACAT CATCATGGTC AAGGCCATGT GGCGTCTGCG TGAGGACGTC
GAGGCGAAGA TCAACCGCCT GCCCCTGTCC TACTTCGACC GGGTGCAGCG CGGCGAGCTG
ATCTCTCGCG TCACCAACGA CATCGACAAC ATCACGCAGA CGATGCAGCA GTCGCTGTCG
GGGGCCATCA CCGCGGTGCT CACCCTGGTC GGTGTGCTCG CGATGATGTT CTCGCTGTCG
TGGCAGCTCG CGCTGGTCAC GCTCGCCACC CTGCCCCTCA TGGGCGTGCT GTTCGGCATC
ATCGGCCCCA AGTCGCAGAA GGCGTTCAGC CTGCAGTGGC GCAAGGTCGG GCGCCTCAAC
GCGCGCGTCG AGGAGTCGTT CTCGGGCCAC GCGCTGGTCA AGACCTTCGG CCGCCGCAAG
GACTTCGAGG CCCGGTTCGC CGCCGAGAAC CACGAACTGT ACGAGCAGTC GTTCAAGGCG
CAGTTCCTGG CCAACATCAT GTGGCCGGCG ATGTCGTTCA TCGGCAACGT CTCGTTCATC
GCCATCGCCG TCATCGGTGG CCTGTTCGTG GCCGGCGGCA CCATGACCCT CGGCGCCATC
CAGGCGTTCA TCCAGTACTC GCAGATGTTC TCCCAGCCGC TGCAGCAGCT CGGTGGCATG
GTCGCCGTCG TCCAGTCGGG CACCGCCTCG GCCGAGCGCG TCTTCCAGCT GCTCGACGTC
GACGAGCAGG AGGCCGACGC TGCCGACGCA CCGGCCCCGG TCGAGGGGGA CGGCGTCATC
GAGTTCGAGC ACGTCAGGTT CTCGTACTCC CCGGACAAGC CGCTCATCGA GGACCTGTCG
TTCACCGTCC GCCCCGGGCA GACGGTCGCG ATCGTGGGGC ACACGGGCGC CGGCAAGACG
ACGCTGGTCA ACCTGCTCAT GCGGTTCTAC GACCCGCAGG GCGGCCGCAT CCTGGTCGAC
GGCCAGGACA TCGGCGACCT CACCCGGCAC GACGCCCGCG CCCGCACCGG CATGGTGCTC
CAGGACACCT GGCTGTTCGC CGGGACCATC CGGGAGAACA TCCGCTACGG CCGCCAGGAC
GCCACGGACG AGGAGATCCT CGCCGCGGCC CAGGCCACCT ACGTGGACCG GTTCGTGCAC
TCGCTGCCGC ACGGGTACGA CACCGTGCTG GAGGAGGACG CCGCCAACCT GTCGGCCGGG
GAGCGGCAGC TCATCACGAT CGCCCGCGCG TTCGTGTCGC AGCCGTCGAT CCTCATCCTC
GACGAGGCGA CGTCGTCCGT GGACACCCGC ACCGAGAAGC TGCTCCAGCA CGCCATGGCG
TCGCTGCGCA GCGGGCGGAC GTCGTTCGTC ATCGCGCACC GTCTCTCCAC GATCCGCGAC
GCCGACCTCA TCCTGGTGAT GGCGCACGGC GCGATCGTCG AGCAGGGCAC CCACGCCGAG
CTGCTCGCGG CCGACGGGGC GTACGCCGAG CTGTACCAGT CGCAGTTCAC CGGTGCGTTC
GACGAGGACG TGGACGAGGG CGTGGTGGTC CAGCAGGCGT GA
|
|---|
| Protein sequence | MSEKNLSGTQ DAVEPAVPDQ TLQPAAPLSP AEARAAAKAE ARKAKAEARK AKAEARKAKW
AAMGAESTEG LTEEEKLEIE LGEAARLASE SWDGVAPGKA KNFKESFGRM LGLLAPYKVA
LVVVTLMGAA SVVLSVWAPR VLGRATDVIF SGLFSRSFPQ GMTQDQAVEA VRAGGQNRIA
DMIAAMDHFV PGEGIDFDLL RTFMVTVLVI YVFAALLGWA QGFITNIIMV KAMWRLREDV
EAKINRLPLS YFDRVQRGEL ISRVTNDIDN ITQTMQQSLS GAITAVLTLV GVLAMMFSLS
WQLALVTLAT LPLMGVLFGI IGPKSQKAFS LQWRKVGRLN ARVEESFSGH ALVKTFGRRK
DFEARFAAEN HELYEQSFKA QFLANIMWPA MSFIGNVSFI AIAVIGGLFV AGGTMTLGAI
QAFIQYSQMF SQPLQQLGGM VAVVQSGTAS AERVFQLLDV DEQEADAADA PAPVEGDGVI
EFEHVRFSYS PDKPLIEDLS FTVRPGQTVA IVGHTGAGKT TLVNLLMRFY DPQGGRILVD
GQDIGDLTRH DARARTGMVL QDTWLFAGTI RENIRYGRQD ATDEEILAAA QATYVDRFVH
SLPHGYDTVL EEDAANLSAG ERQLITIARA FVSQPSILIL DEATSSVDTR TEKLLQHAMA
SLRSGRTSFV IAHRLSTIRD ADLILVMAHG AIVEQGTHAE LLAADGAYAE LYQSQFTGAF
DEDVDEGVVV QQA
|
|---|
| |