Gene Xcel_1070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXcel_1070 
Symbol 
ID8648583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylanimonas cellulosilytica DSM 15894 
KingdomBacteria 
Replicon accessionNC_013530 
Strand
Start bp1148405 
End bp1150153 
Gene Length1749 bp 
Protein Length582 aa 
Translation table11 
GC content70% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003325659 
Protein GI269955870 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCTTCGTC AGATCCTGTG GCGCTACCTG CGCCCGTACC GATGGCTCCT CGTCGGCATC 
CTGGTCTTCC AGTTCGCCGC CGCAATCGGG ATGCTCTACC TGCCGCACCT CAACGCCCGG
ATCATCGACG AGGGCGTGGC CCAGGGTGAC ACCGGCTACA TCTGGCGCAC GGGCGCGATC
ATGCTCGCCG TGTCGTTCGG CCAGATCCTC GCGGCCGTGA TCGCCACCTG GTTCGCCGCC
CGGGCCTCGA TGGCCCTGGG ACGTGACCTG CGCGACGCCG TCTACTCGCG CGTCTCCGGC
TTCTCGGAGC GGGAGGTCTC CGAGTTCGGC GCGGGGTCGC TCATCACCCG CAACACGAAC
GACGTCCAGC AGGTCCAGAT GATCGCGATG ATGGGCTCCA CGATGCTCGT CTCGGCGCCC
CTGCTGGCCA TCGGCGGCAT CATCATGGCG CTGCGCCAGG ACGTGCAGCT CTCCTGGATC
CTCGCGGTCT CCGTGCCGCT GCTGCTGATC TTCGCGGCCT TCATCATCGG CCGGATGGTG
CCCCTGTTCC GCGAGTACCA GCTCCGGCTC GACACCCTCA ACCGGGTCAT GCGCGAGCAG
CTCACCGGCA TCCGCGTGGT GCGCGCGTTC GTGCGGGAGT CCATCGAGGA GGCGCGCTAC
CGCGCCGCCA ACACCGACAT GCTCGTGGTG GGCCGCAAGG TCGGCTCGCT GTTCGTGGTG
ATGTTCCCCG GCGCGATGTT CATCCTCAAC GTGACCATCC TCGGCGTGCT GTGGTTCGGC
GCGGTCGAGG TGGACGCGCA GCGTGTCCAG GTGGGCACCC TGCTGGCGTT CATGCAGTAC
GTGGGCCAGA TCCTCGGTGG CGTGCTCATG GCCACGTTCA TGACGATCAT GATCCCGCGC
GCGGCCGTCT CGGCCGACCG CATCGGGCAG GTCCTGGCCG TGGAGTCGTC CCTGCACGAG
CCCGAGGTCC CCGTCGCACG GCTCACGACG CCGGGAACCA TCGAGTTCGA CGACGTCACG
TTCGCCTATC CGGGCGCCGA GACTCCGATC CTCGGCGGCG TCTCGTTCAC GGTCGAGCCC
GGGCAGACGG TCGCCGTCGT CGGCTCCACC GGTGCGGGCA AGACGACGCT GCTCAACCTG
GTCGCCCGCC TGATCGACAC CACGCAGGGC GCCGTGCGCG TCGGCGGCGT CGACGTGCGT
GACCTGAGCC TGGAGACGCT GTGGGGCGGG CTCGGCCTGG TGCCGCAGCG CCCGTTCCTG
TTCGCCGGGA CGGTCGGCTC GAACGTGCGC CTCGGCAACG AGGACGCCAC GGACGAGGAG
GTGTGGAAGG CCCTCGAGAT CGCCCAGGGC AAGGAGTTCG TCGCCGAGAT GGAGGGCGGC
CTGGACGCGC GCATCGCGCA GGGCGGCACC AACGTCTCCG GCGGGCAGCG GCAGCGGCTC
GCCATCGCGC GCGCCGTGCT GCGCCGCCCG GACGTCCTGC TCCTGGACGA CTCGTTCTCG
GCGCTCGACG TCGCCACGGA CGCCCGGCTG CGTCAGGCGT TGTGGCGCGA GCTGCCCGGG
GTGACCAAGC TCGTCGTCGC GCAGCGCGTC ACCACGGTGA CCGACGCCGA CGCCATCCTG
GTGCTCGACG ACGGCCGCCT GGTCGGTGCG GGCACGCACG AGGAGCTGCT GGCCACCAAC
ACGACCTACC GCGAGATCGC GGAGTCCCAG ATCACCGTGT CCGCGACCAC CGGGGAGGCG
GGCGCATGA
 
Protein sequence
MLRQILWRYL RPYRWLLVGI LVFQFAAAIG MLYLPHLNAR IIDEGVAQGD TGYIWRTGAI 
MLAVSFGQIL AAVIATWFAA RASMALGRDL RDAVYSRVSG FSEREVSEFG AGSLITRNTN
DVQQVQMIAM MGSTMLVSAP LLAIGGIIMA LRQDVQLSWI LAVSVPLLLI FAAFIIGRMV
PLFREYQLRL DTLNRVMREQ LTGIRVVRAF VRESIEEARY RAANTDMLVV GRKVGSLFVV
MFPGAMFILN VTILGVLWFG AVEVDAQRVQ VGTLLAFMQY VGQILGGVLM ATFMTIMIPR
AAVSADRIGQ VLAVESSLHE PEVPVARLTT PGTIEFDDVT FAYPGAETPI LGGVSFTVEP
GQTVAVVGST GAGKTTLLNL VARLIDTTQG AVRVGGVDVR DLSLETLWGG LGLVPQRPFL
FAGTVGSNVR LGNEDATDEE VWKALEIAQG KEFVAEMEGG LDARIAQGGT NVSGGQRQRL
AIARAVLRRP DVLLLDDSFS ALDVATDARL RQALWRELPG VTKLVVAQRV TTVTDADAIL
VLDDGRLVGA GTHEELLATN TTYREIAESQ ITVSATTGEA GA