Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xcel_1063 |
Symbol | |
ID | 8648574 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylanimonas cellulosilytica DSM 15894 |
Kingdom | Bacteria |
Replicon accession | NC_013530 |
Strand | + |
Start bp | 1142257 |
End bp | 1144272 |
Gene Length | 2016 bp |
Protein Length | 671 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003325652 |
Protein GI | 269955863 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCAGCTCA TCGCGTCGGA CGTCTCGTTT GCCTACCCCG GCGGGGGCGC TGCCTACTCC GGTGGGAGCC CGACGGCGCA CGCCGACGAC GATCGCGCCG TCGTCTCGGG CGCCGGCACC CGCCGGCCCG TCGGGCTCGC GGGCGGGCAG ACGACGGTCA GCGGTCCCAA GGCCGCCCGC GCCGAGGTCC TGGCCGGCGT CAACCTGCGG GTCACCGCCG GGGTGCGCCT CGGCGTCGTC GGCGAGAACG GGTCCGGGAA GTCGACGCTG CTGCACCTGC TGGCCGGGAC GCTGACGCCC ACCGCCGGCG AGGTGCGCCG CAGCGGGACC GTCGCCGTCG TCGAGCAGGA GCTTCTGCCC GCGCGCGGCG AGACGGTGGG CGACGTCGTC CGCACGGCGC TCGCCGGGGT GCGGCAGGTG GCCGCCGACC TCGACGCCGC GGCCGCGGCG TTCGCCGAGA CCGCGCAGGA AGGGCACGAC GACGCCGCGC TGACCGAGCT GGCCACGCTG CTCACGCGGG CCGACCACCT GGCCGCCTGG GACGCCGACC GCCGCGTCGA CGAGGCGCTC ACGCGGCTCG GCGCCCCGCG CGACCTGGAC CGGACCCTGG AGACGCTGAG CATCGGCCAG CGGTACCGGG TGCGCCTCGC CTGCCGGCTC GCGGAGCGCA GCGACTTCCT GCTGCTCGAC GAGCCGACCA ACCACCTGGA CGACGAGGCC ATCGGCTTCC TGACCGACGA GCTGCTCGCG TGGCGCGGCG GCGTCGTGCT CGTCACGCAC GACCGCCAGC TGCTCGACGA CGTCGCCACC GCGATCTACG ACCTCGACCC GTCCATCGAC GGCAGGCCGG TGCTCTACGG GCAGCCCGGC TACCTCGCCT ACCGGTTCGC CAAGACGCAG GCGCTGCACC GGTGGCGGCA GCGCTACCGG GCCGAACGCA AGCGGGCCGA GAAGCTCGCG GAACGGCTCG ACGCGTCCTA CGAAGGGCTG TCGGACGAGT GGCGGCCGCC GAAGGGCTCG CAGAAGCACC GCCGCAGCAC CCGCGCGCGC ATCCACGTCA AGGCCGCCGA CCGGCTCGTC CAGAGGCTCG AGGCCGACGC CGTCGAGGTG CCGGTGCCGC CCCTCGAGCT CCGTTTCCCG GACTTGCCCA CGCTGAACCC CGGCTGGGAC CCGGCGCAGC CGCTGATCGA GGTCCGCAAC CCGCGCGTCC TCGGCGACCC GGTGGTTGAG CCTGTCGAAA CCACGTCTCC GGTGGTTGAG CCGCTTCCGG TGGTTGAGCC TGTCGAAACC ACGTCCCCGG TGGTTGAGCC GCTTCCGGTG GTTGAGCCTG TCGAAACCAC CCAGCACTCC CAGCACGGGG TGGTTTCGAC AGGCTCAACC ACCGGGGGTG CGGGCGGGGT GGTTTCGACA GGCTCAACCA CCGGGGAACC GGGTGGGAAC GTGCGGCTCG ACCTGCCCGG GGTGCGGGTG GCCGTCCCGG CGGCCGGGCG GTTGCTGGTC GTCGGGCCCA ACGGCTCCGG GAAGTCCACG TTGCTCGGGG TGCTGGCCGG CCGGTTGCCG CTCGCGCGCG GCAGCCGGGT CGCCGTCGAC GGGCTGCGCG TCGGCGTCGT CGGGCAGGAG AACGCCGAGA TCATCGGGCG CGGGCTGGAC GACCCGCGCA CGCTCACCGG GTTCGACGCC GCGGCCAACG AGGCGCTGGC GCTGCTGTCG CGCGGGGCGC TCGACCCCGA CCACGTGGTG CCGGTGGCGG CGCTCGGGCT GCTCGCGGAG GAGGACCTCG ACCGTCCCCT TGCGGAGCTG TCCGCGGGTC AGCGCCGGCG CTTCGAGCTC GCACGCACGC TGCTCGCCGC CCCGCACCTG CTCGTCCTCG ACGAGCCGAC GAACCACCTG TCGATCGACC TGGTCGACGA GCTCACCCGC GCGCTGGACC GCACGAGCGC CGCCGTCGTC GTCGCGACGC ACGACCGCCG CATGCGCGAG GACCTCGCCC ACTGGCCGAC GCTCGAGCTC GACTGA
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Protein sequence | MQLIASDVSF AYPGGGAAYS GGSPTAHADD DRAVVSGAGT RRPVGLAGGQ TTVSGPKAAR AEVLAGVNLR VTAGVRLGVV GENGSGKSTL LHLLAGTLTP TAGEVRRSGT VAVVEQELLP ARGETVGDVV RTALAGVRQV AADLDAAAAA FAETAQEGHD DAALTELATL LTRADHLAAW DADRRVDEAL TRLGAPRDLD RTLETLSIGQ RYRVRLACRL AERSDFLLLD EPTNHLDDEA IGFLTDELLA WRGGVVLVTH DRQLLDDVAT AIYDLDPSID GRPVLYGQPG YLAYRFAKTQ ALHRWRQRYR AERKRAEKLA ERLDASYEGL SDEWRPPKGS QKHRRSTRAR IHVKAADRLV QRLEADAVEV PVPPLELRFP DLPTLNPGWD PAQPLIEVRN PRVLGDPVVE PVETTSPVVE PLPVVEPVET TSPVVEPLPV VEPVETTQHS QHGVVSTGST TGGAGGVVST GSTTGEPGGN VRLDLPGVRV AVPAAGRLLV VGPNGSGKST LLGVLAGRLP LARGSRVAVD GLRVGVVGQE NAEIIGRGLD DPRTLTGFDA AANEALALLS RGALDPDHVV PVAALGLLAE EDLDRPLAEL SAGQRRRFEL ARTLLAAPHL LVLDEPTNHL SIDLVDELTR ALDRTSAAVV VATHDRRMRE DLAHWPTLEL D
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