Gene Xcel_0981 details

Gene Information

• Locus tag: Xcel_0981
• ID: 8648491
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xylanimonas cellulosilytica DSM 15894
• Kingdom: Bacteria
• Replicon accession: NC_013530
• Strand: +
• Start bp: 1057896
• End bp: 1058483
• Gene Length: 588 bp
• Protein Length: 195 aa
• Translation table: 11
• GC content: 73%
• Product: RNA polymerase, sigma-24 subunit, ECF subfamily
• Protein accession: YP_003325570
• Protein GI: 269955781

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 0.748497
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTGCCGA TGAGCAGCCT GCCTGTGGCC GACGTGACCG GCGCCGCACC GGCGCCCGGC 
GCCGCCGAGA CGTGGACGCC CCCGACGTGG GACGCGATCG TGCGCGAGCA CTCCGCCCGC 
GTGTACCGGC TCGCCTACCG CCTGACCGGC AACCGGCACG ACGCCGAGGA CCTCACGCAA 
GAGACGTTCC TGCGCGTCTT CCGCTCGCTG TCGGGCTTCA CGCCCGGCAC GTTCGAGGGC 
TGGCTGCACC GCATCACCAC CAACCTGTTC CTCGACTCGG TGCGCCGCGC CAAGCGGGTG 
CGCATGGACG CGATGGGCGA CGACGCCGCC CGGGTGGTCG ACGACGACGC CTTCGGCCGG 
CCGGAGCGCG GCTTCGAGCA CGCCCACCTC GACAACGACG TGCAGGCGGC CCTCGACGCG 
CTGAGCCCCG AGTTCCGCGC CGCCGTCGTG CTGTGCGACA TCGAGGGCCT GTCGTACGAG 
GAGATCGCGG TGACCCTCGG GGTCAAGCTC GGCACGGTGC GCTCGCGCAT CCACCGCGCC 
CGTGCGCAGC TCCGCGGCGA GCTCGCCCAC CGGAGGACGG ACCGATGA 

 

Protein sequence

MVPMSSLPVA DVTGAAPAPG AAETWTPPTW DAIVREHSAR VYRLAYRLTG NRHDAEDLTQ 
ETFLRVFRSL SGFTPGTFEG WLHRITTNLF LDSVRRAKRV RMDAMGDDAA RVVDDDAFGR 
PERGFEHAHL DNDVQAALDA LSPEFRAAVV LCDIEGLSYE EIAVTLGVKL GTVRSRIHRA 
RAQLRGELAH RRTDR