Gene Xcel_0962 details

Gene Information

• Locus tag: Xcel_0962
• ID: 8648472
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xylanimonas cellulosilytica DSM 15894
• Kingdom: Bacteria
• Replicon accession: NC_013530
• Strand: +
• Start bp: 1038346
• End bp: 1040283
• Gene Length: 1938 bp
• Protein Length: 645 aa
• Translation table: 11
• GC content: 70%
• Product: GTP-binding protein TypA
• Protein accession: YP_003325551
• Protein GI: 269955762

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.0622618
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTGTGC GCTCCGACCT GCGCGTTCGT TCTGACCTGC GCAATGTCGC GATCGTCGCC 
CACGTCGATC ATGGCAAGAC CACCCTCGTC GACGCGATGC TCAAGCAGGC CGGTGCCTTC 
GGCGCCCACC AGCACGTCGA GGACCGGGTC ATGGACTCGG GCGACCTCGA GCGCGAGAAG 
GGCATCACGA TCCTCGCCAA GAACACCGCG GTCCGGTACA CCGGCCCGTC GGCGGCGGCG 
CACGGCGAGG CCGGCGGCAT CACCATCAAC GTCATCGACA CCCCGGGCCA CGCCGACTTC 
GGCGGTGAGG TCGAGCGCGG CCTGTCGATG GTCGACGGCG TCGTGCTGCT GGTCGACGCG 
TCCGAGGGCC CGCTGCCGCA GACCCGCTTC GTGCTGCGCA AGGCGCTCGC CGCGAAGCTG 
CCCGTCATCG TCGTCGTGAA CAAGACGGAC CGCCCGGACG CGCGCATCAC GGAGGTCGTG 
GGGGAGACGA CGGACCTGCT GCTCGGCCTG GCCTCGGACC TCGCGGACGA GGTCCCGGAC 
CTCGACCTGG ACGCGATCCT CGACGTGCCG GTCGTCTACG CGGCCGCCAA GGTGGGCGCG 
TCGTCGCTGG AGCAGCCGGC CGACGGCTCG GCGCCCGAGA ACGACAACCT CGAGCCGCTG 
TTCGCGACCA TCCTCGAGAA GATCCCGGCC CCGACGTACG AGGACGGCGT GCCGCTGCAG 
GCGCACGTCA CCAACCTCGA CGCGTCCCCG TTCCTGGGCC GCCTCGCGCT GCTGCGCGTC 
TACAACGGCA CGCTGCGCAA GGGCCAGCAG GTCGCGTGGG CACGCCACGA CGGGACGCTC 
TCGCAGGTCA AGATCACCGA GCTGCTCGAG ACGAAGGGCC TGGACCGTGT CCCGGCCGAG 
TCCGCAGGGC CTGGCGACAT CGTCGCCGTC GCCGGCATCG CCGACATCAT GATCGGCGAG 
ACGCTCACCG ACCTGAACGA CCCGCGCCCG CTGCCGCTCA TCACGGTCGA CGACCCGGCC 
ATCTCGATGA CCGTCGGCAT CAACACCTCC CCGCTGGCCG GCAAGGGCGG CAAGGGCCAC 
AAGGTCACGG CCCGCCAGGT CAAGGACCGC CTCGACTCCG AGCTCATCGG CAACGTCTCG 
CTGCGCGTGC TGCCCACCGA GCGCCCCGAC GCGTGGGAAG TCCAGGGCCG CGGCGAGCTC 
GCGCTGGCGA TCCTCGTCGA GCAGATGCGT CGCGAGGGCT TCGAGCTCAC CGTCGGCAAG 
CCCCAGGTCG TCACCCGCAC GATCGACGGC AAGGTGCACG AGCCGATGGA GCGCATGACC 
ATCGACGTGC CCGAGGAGTA CCTCGGTGCC GTCACCCAGC TCCTCGCGCA GCGCAAGGGC 
CGCATGGAGA CCATGTCGAA CCACGGCACC GGCTGGGTCC GCATGGAGTT CATGGTTCCC 
GCGCGCGGCC TTATCGGCTT CCGCACCCGG TTCCTCACCG AGACCCGCGG TACCGGCATC 
GCCGCGTCCA TCGCGGAGGG GTACGAGCCG TGGGCCGGGA CCATCGAGTC GCGCATGACC 
GGTTCGCTCG TCGCCGACCG CGCCGGCAAG GTGACGCCGT TCGCCATGAT CAACCTGCAG 
GAGCGCGGCT CCTTCTTCGT CGACCCCACC CAGGAGGTCT ACGAGGGCAT GATCGTCGGT 
GAGAACTCGC GCAACGAGGA CATGGACGTC AACATCACCA AGGAGAAGAA GCTCACCAAC 
ATGCGGTCGT CGACCGCGGA CAACTTCGAG AACCTCATCC CGCCGCGCAA GCTCACGCTC 
GAGGAGTCCC TCGAGTTCGC GCAGGAGGAC GAGTGCGTCG AGGTGACCCC CGAGGTGGTG 
CGCATCCGCA AGGTGGCCCT GGACCAGGTG GAGCGCGCCC GCGCCGCGTC CCGCGCCCGG 
GCCGCCTCCA AGGGCTGA 

 

Protein sequence

MAVRSDLRVR SDLRNVAIVA HVDHGKTTLV DAMLKQAGAF GAHQHVEDRV MDSGDLEREK 
GITILAKNTA VRYTGPSAAA HGEAGGITIN VIDTPGHADF GGEVERGLSM VDGVVLLVDA 
SEGPLPQTRF VLRKALAAKL PVIVVVNKTD RPDARITEVV GETTDLLLGL ASDLADEVPD 
LDLDAILDVP VVYAAAKVGA SSLEQPADGS APENDNLEPL FATILEKIPA PTYEDGVPLQ 
AHVTNLDASP FLGRLALLRV YNGTLRKGQQ VAWARHDGTL SQVKITELLE TKGLDRVPAE 
SAGPGDIVAV AGIADIMIGE TLTDLNDPRP LPLITVDDPA ISMTVGINTS PLAGKGGKGH 
KVTARQVKDR LDSELIGNVS LRVLPTERPD AWEVQGRGEL ALAILVEQMR REGFELTVGK 
PQVVTRTIDG KVHEPMERMT IDVPEEYLGA VTQLLAQRKG RMETMSNHGT GWVRMEFMVP 
ARGLIGFRTR FLTETRGTGI AASIAEGYEP WAGTIESRMT GSLVADRAGK VTPFAMINLQ 
ERGSFFVDPT QEVYEGMIVG ENSRNEDMDV NITKEKKLTN MRSSTADNFE NLIPPRKLTL 
EESLEFAQED ECVEVTPEVV RIRKVALDQV ERARAASRAR AASKG