| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_0780 |
|---|
| Symbol | |
|---|
| ID | 8648289 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | + |
|---|
| Start bp | 848566 |
|---|
| End bp | 852144 |
|---|
| Gene Length | 3579 bp |
|---|
| Protein Length | 1192 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | |
|---|
| Product | UvrD/REP helicase |
|---|
| Protein accession | YP_003325376 |
|---|
| Protein GI | 269955587 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.15427 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCACGC CGGACGAGAA CCCCCGGCTC GACCCGCACG GGTCGTCGGC CGCCGACGCG
CCCTTCGACG ACTGGGCCGC CCTCGGCAGC ACCCCGGGCG ACAGCGCGCT CAGCCCGGCC
CGGCCCGACG ACGCGGCGCT GCTCCCGGCG GCACCCGACG ACGTCGCCCC GCGACCCGTC
CTCTCCGCAC GCGAGATCGC GCGGCTCATC GGCCGCCACG AGCCGACGGA CGAGCAGGTC
GCCGTCATCG AGGCCCCGCT CGAGCCGACG CTCGTGGTGG CCGGCGCAGG CTCGGGCAAG
ACGGAGACCA TGGCCGCGCG CGTCGTGTGG CTCATCGCCA ACGGCCTGGT GGAGCCCGAG
CAGGTGCTCG GCCTGACGTT CACGCGCAAG GCGGCGGGGG AGCTGCAGAC GCGCGTCACC
TCGCGGCTCG CGCAGCTCGC GCGTGCTCGT ACCCGCGCGG GGCACGGTCC CGCCTCGGCC
GCCGACGCCG CCATCGACCT CCTGGCCCGC CCCACGATCG CCACGTACAA CGCCTACGCG
GCCTCGCTGG TCACCGACCA CGGCCTGCGC CTGGGCGTCG AGCCGGGCTC GCGCCTGCTG
GGCGAGGCGA ACCAGTGGCA GCTCGCGAAC CAGCTCGTCG AGTCCTGGGA CGAGGATCTG
GGCACGGACC GGTCGGTGTC CGGCGTCGTC GGCGGGGTCA TCGGGCTCTC CGGGGAGCTC
GGGGAGCACC TCGTCGACGT CGACGACGCC CGCGCGATGC TCGACGCGAT GATCGAGCGG
CTGTCGGCGC TGCCGCTGGG CCCGAGGCAG CGCACCCGCG GGGCCGACAA CGAGAAGCTG
TTGCGGAGTC TGGCCGAACG CCGGGGACTG CTGGACCTGG TCGCGGAGTA CCGCCGGCGG
AAGCGGGCCG CCGACGCCCT CGACTTCGGC GACCAGATCG CCTTCGCCGC CGAGCTGGCC
CGCTCGGTGC CGTACGTCGG TGAGGTGGAG CGCGCCCGGT TCCGCGTGGT GCTGCTCGAC
GAGTACCAGG ACACGTCGTA CGCGCAGGTC GAGCTGCTTG CCGGCCTGTT CGGCGGCGGT
CATGCTGTGA CGGCGGTCGG TGACCCGCAC CAGTCGATCT ACGGCTGGCG GGGCGCGTCG
GCGTCGGGCC TCGCGCGGTT CCCGGAACGC TTCCGGCACG CCGACGGCGC CCCGGCGGGT
GTGCGCTACC TGTCGACGTC GTGGCGCAAC GACGCCGCCG TGCTGGCCGC CGCGAACATC
GCCTCGGCGC CGCTGCGCGC GGAGCTGACC ACGCACGTCC CGCCGCTGGA CCTGCGGCCG
GGCGCCGGCG CCGGCGTCGT CAGCGCGCAC GTGGCGACGA CGCTCGAGGA GGAGGCCGAG
GCCGCTGCGG AGTGGGTCGC CGAGCGCTGG CGACCCGGAA CGCACCCCCA CGGGCGCGTC
ACGGCAGCGG TGCTGTGCCG CAAGCGGTCG CAGTTCGCGG CCGTCGAGGT GGCTCTGCGC
CGCCGCGGCC TGCCCGTCGA GGTCGTGGGT CTGGGCGGCC TGCTGTCCAC ACCCGAGGTG
GTCGACGTCG TCGCGCTGCT CGAAGCGGTG CACGACCCGT CGCGCGGCGA CTCGCTGCTG
CGCCTGCTCA CCGGTCCGCG CGTCAACCTC GGCGCCGCCG ACCTGCACGC GCTGGGCTCG
CGGGCCGCCG ACCTCGCCCG GGAGGACGAC CCACGGCGCG CGGCGGGCCG GGCGCACTCC
GACGGTGACG CACCCGCCGC GCCGGACGGC GGTTCCGGTG AGGCCGATGA CCTCGCCGTC
GTCGAGGGTG ACGTCGTCGA CCACCGCTCC CTCGTCGACG CCCTCGACGA CCTCCCCCAG
CCCGGCCGCG CCGCACGCGA CGGAAGGGTG CTCACCCCGG CGGGACATAC GCGCCTCGCA
GCGCTGCGGT CCGTGCTGCG CAGCCTGCGC GGCCTGACCT ACCTGTCCCT GCCCGAGCTC
GTGGTCCAGG CCGAACGGGC GCTCGGCCTG GACGTCGAGG TCGCCACCGC CGACGCCGTC
GCGACCTTGG TCCCGGACGC GGGGGAGCGG GTCAGCCGGC GTGGGCGCGA GCACCTCGAC
GCGTTCCGCG ACGTCGCCGC CACGTTCGCG CAGTCCGCGG ATGCTGCCAC GCTGGGTGCG
TTCCTCGCCT GGCTGGGCGT GGCCCAGAAG CAGGAACGCG GCCTCGACCT GCCCGTGCGC
GAGCCTGACC CGGACGCCGT CCAGGTCATC ACCGCGCACG CCGCCAAGGG CCTGGAATGG
GACGTCGTGG CCGTGCCCGG CCTGGTCGAC GGCGTGTTCC CCACGATCGC CGAGGCGGCG
AACGGGCAGC GGGCCGAGAG CGCGTGGCTG ACCGACGTCG CCGCCCTGCC GTACCCGCTG
CGCGGCGACG ACGCCGACCT TCCGGCGTTC CGCTGGGAGG CGGCCGTCGA CACGAAGGAG
CTGGACGGGC TGCGCGGCGA GTTCCGCGCC GCCTGCGGGG AGCACGCCCT CGCCGAGGAG
CGGCGGCTCG CGTACGTCGC CTTCACGCGC GCCCGGCGCG AGCTCTTGCT GACCGCCCAC
TGGTGGGGCA CGTCCTCCAC GCCACGTCGG CTCTCACCGT TCCTCGTCGA GCTGGTCGAG
GTGGGACTGG TCACCGCGGA CGGTTGGACG GCTGCACCGG ACGCCGCGGA CAGCAACCCG
CGCGACGACG TCGAGGTCAC CGCCTCCTGG CCGGCCGTCG ACGACGTCGA GGTCGGCTCG
CCACGCGACG TCCTGCGGGC GACCGCGGCC TTGGTCGACG CCGCCGCGAC GGATCGGGCG
GCGCACGCCG TTGCTGCCGA CGGCGTGCTG GTCGACGCCG CCGGGCACGA CATCGTGGAG
CTGGCCCGCA TCCTGCTCGC CGAGCGGGAC GAGCGTTCGG GCCACGAGGT CGAGATGCCG
GCGCACGTCT CCGCCTCCGG GCTGGTGCGG CTGGCGACCG ACCGCGACGA GTTCGCCCTG
CAACTGCGTC GCCCGGTCCC GGCCGAGCCC ACCGTGCACG CCCGCCGCGG CACGCGCTTC
CACGAGTGGG TCGAGCAGCA GTTCGCGTCG TCGGCCCTGT TCGACGTCGA CGACCTGCCC
GGCGCCGACG ACGGAGACCT GCCCGGTGAC GCGGACCTCG ACGTGCTCAA GGAGAAGTTC
CTGGTGAGCG AGTGGGCGGA TCGCACCCCG ATCGCCGTCG AGCAGGACGT CGAGACGCCG
CTCGCCGGGA TCATGACGCG CTCCCGGATG GACGCCGTCT TCGCGGACCC CGACGGAGAA
CCCGGCTCCG TGGTCGTCGT CGACTGGAAG ACGGGTCGTC CACCCACCGA CACGGCTGCC
CGCGCGGCCC GAGAGGTGCA GCTCGCCGTC TACCGCCTCG CGTGGTCGCG CTGGACGGGC
CTGCCGCTCG ACAAGGTCAG CGCGGCGTTC TGCTACGTGG CGACCGGCGA GACGGTACGC
CCGGAGCGGC TCGCCACGGA GGCAGAGCTG GAGGCCCTGA TCCGCGGTGT ATCGGAGTCT
CCTGACCGTG CCCGGCACGG TGCCTCGGCC AGCACGTGA
|
|---|
| Protein sequence | MSTPDENPRL DPHGSSAADA PFDDWAALGS TPGDSALSPA RPDDAALLPA APDDVAPRPV
LSAREIARLI GRHEPTDEQV AVIEAPLEPT LVVAGAGSGK TETMAARVVW LIANGLVEPE
QVLGLTFTRK AAGELQTRVT SRLAQLARAR TRAGHGPASA ADAAIDLLAR PTIATYNAYA
ASLVTDHGLR LGVEPGSRLL GEANQWQLAN QLVESWDEDL GTDRSVSGVV GGVIGLSGEL
GEHLVDVDDA RAMLDAMIER LSALPLGPRQ RTRGADNEKL LRSLAERRGL LDLVAEYRRR
KRAADALDFG DQIAFAAELA RSVPYVGEVE RARFRVVLLD EYQDTSYAQV ELLAGLFGGG
HAVTAVGDPH QSIYGWRGAS ASGLARFPER FRHADGAPAG VRYLSTSWRN DAAVLAAANI
ASAPLRAELT THVPPLDLRP GAGAGVVSAH VATTLEEEAE AAAEWVAERW RPGTHPHGRV
TAAVLCRKRS QFAAVEVALR RRGLPVEVVG LGGLLSTPEV VDVVALLEAV HDPSRGDSLL
RLLTGPRVNL GAADLHALGS RAADLAREDD PRRAAGRAHS DGDAPAAPDG GSGEADDLAV
VEGDVVDHRS LVDALDDLPQ PGRAARDGRV LTPAGHTRLA ALRSVLRSLR GLTYLSLPEL
VVQAERALGL DVEVATADAV ATLVPDAGER VSRRGREHLD AFRDVAATFA QSADAATLGA
FLAWLGVAQK QERGLDLPVR EPDPDAVQVI TAHAAKGLEW DVVAVPGLVD GVFPTIAEAA
NGQRAESAWL TDVAALPYPL RGDDADLPAF RWEAAVDTKE LDGLRGEFRA ACGEHALAEE
RRLAYVAFTR ARRELLLTAH WWGTSSTPRR LSPFLVELVE VGLVTADGWT AAPDAADSNP
RDDVEVTASW PAVDDVEVGS PRDVLRATAA LVDAAATDRA AHAVAADGVL VDAAGHDIVE
LARILLAERD ERSGHEVEMP AHVSASGLVR LATDRDEFAL QLRRPVPAEP TVHARRGTRF
HEWVEQQFAS SALFDVDDLP GADDGDLPGD ADLDVLKEKF LVSEWADRTP IAVEQDVETP
LAGIMTRSRM DAVFADPDGE PGSVVVVDWK TGRPPTDTAA RAAREVQLAV YRLAWSRWTG
LPLDKVSAAF CYVATGETVR PERLATEAEL EALIRGVSES PDRARHGASA ST
|
|---|
| |