| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_0621 |
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| Symbol | |
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| ID | 8648130 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylanimonas cellulosilytica DSM 15894 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013530 |
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| Strand | + |
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| Start bp | 683479 |
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| End bp | 687354 |
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| Gene Length | 3876 bp |
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| Protein Length | 1291 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | |
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| Product | DNA-directed RNA polymerase, beta' subunit |
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| Protein accession | YP_003325218 |
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| Protein GI | 269955429 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCTCGACG TCAACGTCTT CGACGAGCTG CGTATCGGCC TGGCCACGGC CGACGACATC
CGCGCATGGT CGCACGGCGA GGTCAAGAAG CCCGAGACCA TCAACTACCG CACCCTCAAG
CCCGAGAAGG ACGGCCTCTT CTGCGAGAAG ATCTTCGGCC CCACCCGGGA CTGGGAGTGC
TACTGCGGCA AGTACAAGCG CGTGCGCTTC AAGGGCATCG TCTGCGAGCG CTGCGGTGTG
GAGGTCACGC GGTCCAAGGT GCGCCGTGAG CGCATGGGCC ACATCGAGCT GGCCGCCCCG
GTCACGCACA TCTGGTTCTT CAAGGGTGTG CCGTCCCGCC TGGGCTACCT GCTCGACCTC
GCGCCCAAGG ACCTGGAGAA GGTCATCTAC TTCGCGGCCT ACATGATCAC GTGGGTCGAC
GAGGAGGGCC GTCACGAGGA CCTGCCGCGT CTCCAGAACG AGATCGACCT GGAGAAGAAG
GAGATCGCGG ACCGCCGCGA CAACGACATC AACGCCCGCG CCCTCAAGCT CGAGCACGAC
ATCGCCGAGC TCGAGGCCGA GGGTGCCAAG GCCGACGCAC GCCGCAAGGT GCGCGACGCC
GCGGAGCGCG AGATGGCGAA CCTGCGCAAG CGCGCGGACG CCGAGCTCGA CCGTCTCGAG
AACGTGTGGG ACCGCTTCAA GAACCTCAAG GTCGCCGACC TCGAGGGTGA CGAGATGCTG
TACCGCGCGC TGCAGGACCG GTACGGCACG TACTTCGAGG GCTCGATGGG CGCCGCGGCG
ATCCAGAAGC GCCTCGAGTC GTTCGACCTG GAGGCGGAGA GCGCGAACCT GCGCGAGATC
ATCCGCTCGG GCAAGGGGCA GCGCAAGACC CGCGCGCTCA AGCGCCTCAA GGTGGTCAAC
GCGTTCCTCA CGACGACGAA CTCGCCGACC GCGATGGTGC TCGACGCCGT CCCGGTCATC
CCGCCGGACC TGCGCCCGAT GGTGCAGCTC GACGGTGGCC GGTTCGCGAC GTCGGACCTG
AACGACCTGT ACCGCCGCGT GATCAACCGC AACAACCGTC TCAAGCGCCT GCTCGACCTC
GGGGCTCCCG AGATCATCGT GAACAACGAG AAGCGGATGC TCCAGGAGGC CGTGGACTCG
CTGTTCGACA ACGGTCGCCG CGGTCGTCCG GTGACGGGCC CGGGCAACCG CCCGCTGAAG
TCCATCTCGG ACATGCTCAA GGGCAAGCAG GGCCGGTTCC GCCAGAACCT GCTCGGCAAG
CGCGTCGACT ACTCGGGCCG TTCGGTCATC GTCGTCGGCC CCACCCTGAA GCTGCACCAG
TGCGGTCTGC CCAAGCAGAT GGCGCTCGAG CTGTTCAAGC CGTTCGTGAT GAAGCGCCTC
GTGGAGCTCA ACCACGCGCA GAACATCAAG AGCGCCAAGC GCATGGTCGA GCGCACGCGC
TCGGTCGTGT GGGACGTGCT GGAGGAGGTC ATCACCGAGC ACCCCGTGCT GCTCAACCGT
GCCCCCACCC TGCACCGTCT GGGCATCCAG GCGTTCGAGC CGCAGCTCGT CGAGGGCAAG
GCCATCCACC TGCACCCGCT CGTGTGCGCC GCGTTCAACG CGGACTTCGA CGGTGACCAG
ATGGCCGTCC ACCTGCCGCT GAGCGCGGAG GCGCAGGCCG AGGCCCGCAT CCTCATGCTC
TCGAGCAACA ACATCCTCAA GCCGTCGGAC GGCCGTCCGG TGACCATGCC CTCGCAGGAC
ATGATCATCG GTCTGCACCA CCTGACGTCG GACCGCCCGG GCGCCCTGGG CGAGGGGCGC
GTGTTCTCCT CGCAGGCCGA GGCGATCATG GCGTTCGACC GCGGTCAGCT CGACATCAAC
GCGTACGTCA AGATCCGCAT GGACGACGTC GTGTACGAGC CCGGCCAGGA GCCCGAGGGA
TGGGAGCCCG GCGCCACGGA GCTCAAGGAG ACGACGCTGG GCCGCACGGT CTTCAACGAG
GCGCTCCCCG TCGACTACCC GTTCCAGAAC CGGGTGATCG GCAAGAAGGA GCTCTCGGAG
ATCGTCAACG ACCTCGCCGA GTCGTACCCG AAGGTCGAGG TCGCGGCCTC GCTCGACGCG
CTGAAGGACG CCGGCTACAA GTGGGCGACC CGGTCGGGCG TCACGATCGC CATCTCCGAC
GTCGCCATGC CGGCGGTGAA GAACGAGATC CTCGACGAGC ACGAGCAGCG TGCGCTCAAG
GTTCAGCAGC AGTTCGAGCG CGGTCTGATC ACCGACGACG AGCGCCGTCA GGAGCTCATC
GAGATCTGGA CCCAGGCCAC CGACAAGGTC GCCTCGGTCA TGCGCGAGAA CCTCGAGAGC
GACGCCCGCA ACACCCTGTT CCGCATGGTG TCCTCGGGTG CCCGTGGTAA CTGGATGCAG
GTCCGCCAGA TCGCCGGTAT GCGTGGTCTC GTGGCGAACC CGAAGGGCGA GATCATCCCG
CGCCCGATCA AGTCCAACTA CCGCGAGGGT CTGTCCGTCC TCGAGTACTT CATCGCCTCG
CACGGTGCCC GCAAGGGCCT GGCGGACACG GCGCTGCGTA CCGCGGACTC GGGCTACCTG
ACCCGTCGTC TCGTGGACGT CTCGCAGGAC GTCATCATCC GCGAGGAGGA CTGCGGCACC
GAGCGCGGCC TGACCCTGCC GGTCGGGGAG CGCATCGGCG ACACCCTGGT GCCGCACCCC
CGCGTGCAGA CGTCGATCTA CGCGCGCACG CTCGCGGTGG ACGTCGCGAA CGCCGACGGC
ACCGTCATCG CCCAGGGCGG TCACGACGCC GGCGACGCCG AGATCGAGGC GCTGCTCGCG
GCGGGCGTCG AGAACGTCAA GGTGCGCTCG GTGCTCACCT GCGAGTCGCG CGTCGGCACC
TGCGCCAAGT GCTACGGCCG GTCGCTGGCC ACGGGCAAGC TCGTGGACAT CGGCGAGGCC
GTCGGCATCA TCGCGGCCCA GTCGATCGGT GAGCCCGGCA CGCAGCTGAC GATGCGTACC
TTCCACACCG GTGGTGTGGC CTCGGCCGAC GACATCACGC AGGGTCTGCC CCGCGTGACC
GAGCTCTTCG AGGCCCGCAC CCCCAAGGGT GAGGCGCCCA TCGCGGAGTT CACCGGTCGC
CTGGCGATCG AGGACATGGA GCGTTCGCGC GTCCTCGTCC TGACGCCCGA CGACGGCAGC
GAGGAGCTCC GGTACCAGGT CTCCAAGCGC GCTCGCCTGC TGGTCGAGGA CGGCCAGCAC
GTCTCGGTCG GCACGCAGCT CGTCCAGGGT GCGCGCGACC CCAAGAAGGT GCTGCGCATC
CTCGGCCCGC GTGCCGCGCA GAAGTTCCTG GTGGACGAGG TCCAGGAGAC CTACCGCAGC
CAGGGCGTGG ACATCCACGA CAAGCACATC GAGGTCATCG TGCGGCAGAT GCTGCGTCGC
GTGACCGTGC TGGACTCGGG CGACACGAAC CTGCTGCCGG GCGAGCTCGC GGAGCGCACG
CGCTTCGAGG ACGCCAACCG TGGCGCCGTG GCGGAGGGTG GCCACCCGGC CTCCGGCCGT
CCGGAGCTCA TGGGCATCAC GAAGGCCTCG CTCGCCACCG ACTCGTGGCT CTCGGCCGCC
TCCTTCCAGG AGACGACCCG GGTGCTCACG GAGGCGGCGA TGAGCGGCCG TCGGGACCCG
CTGCTGGGCC TCAAGGAGAA CGTCATCATC GGTAAGCTCA TCCCCGCCGG CACGGGCCTG
TCCCGCTACC GGAACATCGA GGTCGAGCCC ACCGAGCAGG CGAAGGCCGA GCTCTACCCG
AGCTTCGGCT ACGACGAGAT CGACTTCCCG ACGCTCGGCA TGGGCTCGGG CGAGGCGATC
CCGCTCGAGG ACCTGGACTT CGGCGACTTC CGCTGA
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| Protein sequence | MLDVNVFDEL RIGLATADDI RAWSHGEVKK PETINYRTLK PEKDGLFCEK IFGPTRDWEC
YCGKYKRVRF KGIVCERCGV EVTRSKVRRE RMGHIELAAP VTHIWFFKGV PSRLGYLLDL
APKDLEKVIY FAAYMITWVD EEGRHEDLPR LQNEIDLEKK EIADRRDNDI NARALKLEHD
IAELEAEGAK ADARRKVRDA AEREMANLRK RADAELDRLE NVWDRFKNLK VADLEGDEML
YRALQDRYGT YFEGSMGAAA IQKRLESFDL EAESANLREI IRSGKGQRKT RALKRLKVVN
AFLTTTNSPT AMVLDAVPVI PPDLRPMVQL DGGRFATSDL NDLYRRVINR NNRLKRLLDL
GAPEIIVNNE KRMLQEAVDS LFDNGRRGRP VTGPGNRPLK SISDMLKGKQ GRFRQNLLGK
RVDYSGRSVI VVGPTLKLHQ CGLPKQMALE LFKPFVMKRL VELNHAQNIK SAKRMVERTR
SVVWDVLEEV ITEHPVLLNR APTLHRLGIQ AFEPQLVEGK AIHLHPLVCA AFNADFDGDQ
MAVHLPLSAE AQAEARILML SSNNILKPSD GRPVTMPSQD MIIGLHHLTS DRPGALGEGR
VFSSQAEAIM AFDRGQLDIN AYVKIRMDDV VYEPGQEPEG WEPGATELKE TTLGRTVFNE
ALPVDYPFQN RVIGKKELSE IVNDLAESYP KVEVAASLDA LKDAGYKWAT RSGVTIAISD
VAMPAVKNEI LDEHEQRALK VQQQFERGLI TDDERRQELI EIWTQATDKV ASVMRENLES
DARNTLFRMV SSGARGNWMQ VRQIAGMRGL VANPKGEIIP RPIKSNYREG LSVLEYFIAS
HGARKGLADT ALRTADSGYL TRRLVDVSQD VIIREEDCGT ERGLTLPVGE RIGDTLVPHP
RVQTSIYART LAVDVANADG TVIAQGGHDA GDAEIEALLA AGVENVKVRS VLTCESRVGT
CAKCYGRSLA TGKLVDIGEA VGIIAAQSIG EPGTQLTMRT FHTGGVASAD DITQGLPRVT
ELFEARTPKG EAPIAEFTGR LAIEDMERSR VLVLTPDDGS EELRYQVSKR ARLLVEDGQH
VSVGTQLVQG ARDPKKVLRI LGPRAAQKFL VDEVQETYRS QGVDIHDKHI EVIVRQMLRR
VTVLDSGDTN LLPGELAERT RFEDANRGAV AEGGHPASGR PELMGITKAS LATDSWLSAA
SFQETTRVLT EAAMSGRRDP LLGLKENVII GKLIPAGTGL SRYRNIEVEP TEQAKAELYP
SFGYDEIDFP TLGMGSGEAI PLEDLDFGDF R
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