Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xcel_0601 |
Symbol | |
ID | 8648109 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylanimonas cellulosilytica DSM 15894 |
Kingdom | Bacteria |
Replicon accession | NC_013530 |
Strand | - |
Start bp | 659314 |
End bp | 660453 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | |
Product | transcriptional regulator, LacI family |
Protein accession | YP_003325198 |
Protein GI | 269955409 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.115964 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCCTCGA GCACCGCAGG GCGCCCGACG CTGGCGAAGG TCGCCGAGCG TGCCGGGGTG TCGGTGTCGA CGGCCTCGCT GGCATTCTCC GGGGCCGGGC CCATCAGCGC CGAGACGCGC GACCGCGTGC TCACCGCCGC CCAGGAGCTG GGCTACTCGG GCCCCAACCC GCTGGGCCGC CAGCTGCGCT CGGGCCGGTC CGGCATCGTC GGCGTCGTCA TCGGCGACAA CCCCGGGCGC GCGTTCCGCG ACCCGGTGTC CGTGCAGGTG CTCGACGGTC TCATGCAGGT GCTCGGCGAG CAGGGACTGG GCGTGCTGCT CGTGCCGGGC TTGCGGCCCG AGGCGAGCGC CCCGTGCACC GACGCGGCCG GGCACGGCGA GCCACCCGCC GCGACCGTCG CGGGCATCGC CCCCGTCGAC CCCCTCGTGG AGTCCGCCGC GATGGACGTC GCCGTCCTGG TGTGGGGCGT GCTGACCGAC GACCCCAACG TCACGGCGCT GCAGCGGCGC GGTGTGCGAG TCGTCGTCGG CGAGGGGCAC GCCGTCGAGG GTGCACCGCT GGTGCGCATC GACGACCGCG CCGGGGCCGC CGAGGCCGCG CGCCACCTGC AGGCGCTCGG CCACACCCGC ATCGCCGAGA TCACGCTGCC CTTCGGCCGC GGCGAACGCT CCGGCCCCGT CGACGCGACG CGACGCGAGC GCGCCGACCG CACCCCGGCG CTGCACCGCA TGGCCGGCGT GCGTGACGTC GTCGAGCCGG TCATCACGTG GGAGACGCCC GCGTCGCTCG TCGAGCACGG GCGCGAGGCC GCGATGGAGA TCCTCGGGCA GTGGGTGCCG GACTCCGAGC GCCCGACGGC GATCTTCGCC CACTCCGACC TGCTGGCCGC CGGTGCCGTC CTCGCGGCGC GCGAGCTGGG TCTGCGCGTG CCCGAGGACG TCTCCATCGC CGGGTTCGAC GGGCTCGACC TGCCGTGGCT CTCCCCCGAC GTGCTCACCA GCGTGAACCA GCCGCTGCGC GAGAAGGGCG AGGCCCTGGG CCGCGCCGTC GTCGGGCTGC TGGCCGGGGA CGCGCCTGAG GTGCAGACCC TGCCCGTGCG GCTCGTCCAG GGGACGACGA CGGGGCCGGC ACCTCGCTGA
|
Protein sequence | MASSTAGRPT LAKVAERAGV SVSTASLAFS GAGPISAETR DRVLTAAQEL GYSGPNPLGR QLRSGRSGIV GVVIGDNPGR AFRDPVSVQV LDGLMQVLGE QGLGVLLVPG LRPEASAPCT DAAGHGEPPA ATVAGIAPVD PLVESAAMDV AVLVWGVLTD DPNVTALQRR GVRVVVGEGH AVEGAPLVRI DDRAGAAEAA RHLQALGHTR IAEITLPFGR GERSGPVDAT RRERADRTPA LHRMAGVRDV VEPVITWETP ASLVEHGREA AMEILGQWVP DSERPTAIFA HSDLLAAGAV LAARELGLRV PEDVSIAGFD GLDLPWLSPD VLTSVNQPLR EKGEALGRAV VGLLAGDAPE VQTLPVRLVQ GTTTGPAPR
|
| |