Gene Xcel_0542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXcel_0542 
Symbol 
ID8648047 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylanimonas cellulosilytica DSM 15894 
KingdomBacteria 
Replicon accessionNC_013530 
Strand
Start bp629430 
End bp630917 
Gene Length1488 bp 
Protein Length495 aa 
Translation table11 
GC content69% 
IMG OID 
Productphage uncharacterized protein 
Protein accessionYP_003325139 
Protein GI269955350 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCCCTCG ACTTCCTGCT CCACGCCGCG GCCGCGTTCG AACCGCCGCC ACCCCCACGC 
TGGGACTCGC CCGCGCAGAT GGGCGCCGAC CTCGACGCCC GGTTCGTGCG GACCCCCGCC
CTCGACCTGA TCGACCGCGA GCTGCTGTGG GCGTTCAACA CCCCGGACTC GCGGCTGATC
CTGTCCATGC CGCCACAGGA GGGCAAGTCC ACCCTCGCGA CGAAGTGGGC GCCAACCTGG
CTGCTCAACC AGCGCCCCGA CACCCGCATC GTCATCGCTT CCTACGCCGC GACCGTGGCC
CGCCGCATGG GCCGCCTCAT CCGCTCCGAG ATCACCACCC ACGCCGACAG CCTCGACATC
CGGCTCAAGG ACGACGTCGC CGCGCAGAAC GAGTTCGAGA TCAAGGGACA CATCGGCGGC
GTCTACGCCG TCGGTGTCGG CGGCGCCCTC ACCTCCCGGC CCGCGGACGT CCTGATCATC
GACGACCCCC TCAAGGACCG TGAGCAGGCC GACTCGGACA CGTACCGGGA ACGCGCCTCC
GACTGGTGGA CATCCACCGC GTCGTCCCGC CTCGCCCCAG GCGCCCCCGT CATCCTGATC
CTGACCAGGT GGCACCACGA CGACCTCGCC GGCCGTCTCA TGGCCGCCGA GGACGGCAAA
CAGTGGCGGT ACGTCAACAT CCCCGCCCAA GCCGACTACG ACCCCGACGC CGGCGAAACA
GACCCGCTCG GCAGGCAGCC GGGCGAGTAC ATGATCTCCG CCCGCGGCCG CACCCACACC
CAGTGGGAAC AGCGGCGCAT GCAGGCCGGA CCCCGCGACT GGAACGCGCT CTACCAGGGC
CGCCCCACCG CCGGATCCGG GGACCTGTTC CCCAAGGAGT GGGCGCGCTA CTCCCAGCCC
ATGCACATCG TGCGCGACGA CGGCTCCTGC TGGGTGCCGG GCACCGGGTT CGAGCTGGTT
CAGTCGTGGG ACTTCACGTT CAAGGACAAG CCCACCTCGG ACTTCGTCGT CGGGCAGGTC
TGGCTGCGCC AGGGCGTCAC CATGTTCCTG CTCGACCAGG TCCGCGCCCG CATGAACTTC
ACCGCCTCCC TGGCGGCCAT CAAGGCCATG ACCGCGAAGT GGCCGCAAGC CGTCGCCAAG
CTCGTCGAGG ACAAGGCGAA CGGCACCGCG ATCATCACCA GCCTGTCCGC GACCGTGCCC
GGCATCATCG CGGTCGAGCC GATCGGGTCG AAGTACGCGC GAGCCTCCGC GATCTCCCCG
TTCGCCCACG CCCACAACAT CGTCCTACCC GACGCGGCAC TCCTGCCGAA CGTCGAAGAA
CTCGTCGAAG AAGCCAAGTC GTTCCCCGCC GGCGCACACG ACGACACCAT CGACGCCCTC
TCGCAGGCGG CCAACCAGCT GCTGCTGCAC CCCCTGCTCG AGCAGGACAC CTTCACCACC
GACGACTTCA CCGACGACGA CCCGTTCGCG TACCTGCGCG GCTACTGA
 
Protein sequence
MSLDFLLHAA AAFEPPPPPR WDSPAQMGAD LDARFVRTPA LDLIDRELLW AFNTPDSRLI 
LSMPPQEGKS TLATKWAPTW LLNQRPDTRI VIASYAATVA RRMGRLIRSE ITTHADSLDI
RLKDDVAAQN EFEIKGHIGG VYAVGVGGAL TSRPADVLII DDPLKDREQA DSDTYRERAS
DWWTSTASSR LAPGAPVILI LTRWHHDDLA GRLMAAEDGK QWRYVNIPAQ ADYDPDAGET
DPLGRQPGEY MISARGRTHT QWEQRRMQAG PRDWNALYQG RPTAGSGDLF PKEWARYSQP
MHIVRDDGSC WVPGTGFELV QSWDFTFKDK PTSDFVVGQV WLRQGVTMFL LDQVRARMNF
TASLAAIKAM TAKWPQAVAK LVEDKANGTA IITSLSATVP GIIAVEPIGS KYARASAISP
FAHAHNIVLP DAALLPNVEE LVEEAKSFPA GAHDDTIDAL SQAANQLLLH PLLEQDTFTT
DDFTDDDPFA YLRGY