Gene Xcel_0540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXcel_0540 
Symbol 
ID8648045 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylanimonas cellulosilytica DSM 15894 
KingdomBacteria 
Replicon accessionNC_013530 
Strand
Start bp626245 
End bp627768 
Gene Length1524 bp 
Protein Length507 aa 
Translation table11 
GC content73% 
IMG OID 
Productphage head morphogenesis protein, SPP1 gp7 family 
Protein accessionYP_003325137 
Protein GI269955348 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCGGTCA CCGACCGCAC GGTGCGCCTG TCCCGGCAGG CCCGCAAGGC CCTCGACGGG 
ATCGTCGACC AGGCCACCCG CGACCTCGTG ATCGCGTGGG CCACCGCGTG GGACGAGATC
GCGGTGACCT GGCAGGCGGC CGTCGACGAC CTCATCGGCT ACCAGGCCGC GAACGGCACG
TGGCCGCCCG CCTGGCGCAT CGCCCGCGCC GAACGCGCCC AGCAGGCGTT GCAGGCCGCA
GCCAAGGCGC TCGTCGACGT GTCCGACACG GCCGGCGCCC GCATCACCCA GGATCTGCCC
GCCCTGACCG GGCAGGCCGC GGACTGGGAG GCGCGGCTCA TCGCCTCCCA GATGCCCCCC
GCGCCTGTGG CCGGTGACAT GTCGGTGGCG GCCACGTTCA ACCGGGTCGA CCCGGACGCG
CTGACCGCGA TCGTGCAACG CACCACCGGT CAGGTCACCG CCCTGGCGTA CCCGTTGGCC
GCCGAGGCGG TCACCGCGAT GAACCGTGAA CTGATCCGCG GGATCGCCGT CGGGGACAAC
CCGCGCATCG CGGCCGCCCG TATGCTCGCC CGCGTCGAGG GCCGCTTCAA CGGGGGTCTG
GCCCGCGCCA TGACGATCGC CCGCACGGAG ATGCTCGACG CGCACCGCGA AGCGTCCCGG
GTGCAGCGGA TCGCGAACGC GGACGTGCTG GCCGGCTGGC AGTGGCAGGC CACCCTCGAC
ACGCGCACCT GCCCGTCGTG CCTCGCCCAG CACGGCAGCA TGCACGCCGT CGACGAGACC
GGCCCGACCG ATCACCAGAA CGGGCGCTGC ACCGCCCTCC CGGTCACGAA GTCGTGGCGC
GACCTCGGGT TCGACATCGA CGAACCGGCC AGCCCACTGC CGGACGCACG CGCCTGGTTC
GACGGGCTGC CCCAGGCCGA ACAACGGGCC ATCCTGGGTC CCACCCGCCT GGAGATGCTG
CACACCGGCC GCATCGGGTG GGCGGACCTG TCCACCCGCA AGAGCGCACC CGGGTGGCGG
GACTCGCACC ACGTGCGATC GGTGCGTGAC CTCGAAGGAC TCGCCGGCGC AGCCGACGGT
TCCGGCGGCG GGTCCGGCTC CTGGGTGACC CGCGCCGGAT CCCCCGACGA CCTGCCCGAC
AGGTACCGCG ACCCCGGTGT TCCGTTCACC CGGTCCACAC GGCCTCGCGC GGCATGGGGT
GCCGCACAGC ACGCGCTCGA ACGGCACGCG CACGAGGCCG GACCCCAGGG CGGAGTGAGC
TACTTTCCCC GGGGCTGGTT CGGCGAGGAC GACAACGACG TCCAGGCGAT GCGCGATCTG
GCCGACTGGG TCACACACCA GGCCGAGCCG CACTGGCAGG ACGCAGGCGC CCTTCGGTTC
GAAGCCTGGG TCGGGGGAGT TCTCGTTCGG GTACCGATCC GACCAGAGCC TGGAACGGAC
GACTGGCGGG TGCGGACCGT CATCCCGGTG CGCGGGAATG GGGTACGCAA GTGGGTCAAC
GGCCGCTACT TCGACGTACC ATGA
 
Protein sequence
MPVTDRTVRL SRQARKALDG IVDQATRDLV IAWATAWDEI AVTWQAAVDD LIGYQAANGT 
WPPAWRIARA ERAQQALQAA AKALVDVSDT AGARITQDLP ALTGQAADWE ARLIASQMPP
APVAGDMSVA ATFNRVDPDA LTAIVQRTTG QVTALAYPLA AEAVTAMNRE LIRGIAVGDN
PRIAAARMLA RVEGRFNGGL ARAMTIARTE MLDAHREASR VQRIANADVL AGWQWQATLD
TRTCPSCLAQ HGSMHAVDET GPTDHQNGRC TALPVTKSWR DLGFDIDEPA SPLPDARAWF
DGLPQAEQRA ILGPTRLEML HTGRIGWADL STRKSAPGWR DSHHVRSVRD LEGLAGAADG
SGGGSGSWVT RAGSPDDLPD RYRDPGVPFT RSTRPRAAWG AAQHALERHA HEAGPQGGVS
YFPRGWFGED DNDVQAMRDL ADWVTHQAEP HWQDAGALRF EAWVGGVLVR VPIRPEPGTD
DWRVRTVIPV RGNGVRKWVN GRYFDVP