| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_0504 |
|---|
| Symbol | |
|---|
| ID | 8648007 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | + |
|---|
| Start bp | 596184 |
|---|
| End bp | 597521 |
|---|
| Gene Length | 1338 bp |
|---|
| Protein Length | 445 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | glycoside hydrolase family 5 |
|---|
| Protein accession | YP_003325101 |
|---|
| Protein GI | 269955312 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGGTG TCGCGGCCAC GCTGGCGAGC GTGGCCGCGC TGCTGACGGC GCCGGTCGCG
CTCGCGGCCG ACGGCAGCGG GGTCGGCATC CACACCGAGG GGACGAGGCT CGTCGAGGCC
GACGGCACCG AGCTGGTGCT GCGCGGCATT AGCCACGCGC ACACCTGGTA CGCGTCGCAG
ACGCGGGCGT TCGCGGACAT CTCCGACGCC GGCGCGAACG CCGTCCGCGT GGTGCTGTCC
GACGGGACCC GGTGGACGAG GAACGGGGCC GACGACGTCG CGGCCGTCAT CGACCGCTGC
TGGGACGAGC AGCTCGTCTG TGTGCTGGAG GACCACGACA CCACCGGCTA CGGCGAGGAG
GGTGCCGCCT CGACGCTGGC GACGGCGGCG GACTACTGGG TGTCGCTGCT GCCGGTGCTG
GCGGGCACCG AGGACCACGT GATCATCAAC CTGGGCAACG AGCCGTACGG CAACGACGCC
GCGACCAACG AGCGCTGGGC GGACGACACC ATCGCCGCGA TCCAGCGCCT GCGCACCGCC
GGGTTCGAGC ACACGATCCT GGTCGACGCG CCGAACTGGG GTCAGGACTG GGCCGGGATC
ATGAAGCGCG ACGCGGCGCA GGTGGCCGCC GCCGACCCGC AGGGCGACGT CGTGTTCTCC
GTGCACATGT ACGGCGTCTA CGACACCGCC GCCGAGGTCC GGGACTATCT GGACGCGTTC
ATCGCCGCGG GCCTGCCGCT CGTGGTCGGC GAGTTCGGCT TCGACCATTC GGACGGGAAC
CCGGACGAGG ACACGATCAT GTCGTACACG CGGGCCCAGG GGATCGGGTG GTTCGCGTGG
TCGTGGAGCG GCAACGGCGG CGGGGTCGAG TACCTCGACA TGGTGACGTC GTTCGACCCC
GCGCAGCGCA CGTCCTGGGG GACGCGCGTG ATCACGGGAC CCGACGGGCT GGCGCAGACG
TCGGTGCGCG CGGCGGTGTT CGGAGGCGGG GACACCGGCG ACGGCGATGG TGACGACGGT
GACGGCGACG GTGACGGTGA CGGTGACGAC GGCGGTACGG AGGAGCCCAC GGGCGCCTGC
ACGGCCGTGC CGCGTGTCTC GAACACGTGG CAGGGCGGCT ACCAGGCCGA GGTGGTGGTG
ACGGCCGCCG CCGCCATCGG CGGATGGACC GTGAGCCTGG GCGTGACGCC CACGCAGATC
TGGGGTGCAG CACTCACGGG CCAGACGGCG TCCAACGAGT CGTGGAACGG CTCCGTGGGC
GCGGGCACGA GCACGACGTT CGGGTTCCTC GGCAGCGGCA CCCCGCCGGC GGCGGGCACC
GTCCCCTGCG CCGCGTGA
|
|---|
| Protein sequence | MAGVAATLAS VAALLTAPVA LAADGSGVGI HTEGTRLVEA DGTELVLRGI SHAHTWYASQ
TRAFADISDA GANAVRVVLS DGTRWTRNGA DDVAAVIDRC WDEQLVCVLE DHDTTGYGEE
GAASTLATAA DYWVSLLPVL AGTEDHVIIN LGNEPYGNDA ATNERWADDT IAAIQRLRTA
GFEHTILVDA PNWGQDWAGI MKRDAAQVAA ADPQGDVVFS VHMYGVYDTA AEVRDYLDAF
IAAGLPLVVG EFGFDHSDGN PDEDTIMSYT RAQGIGWFAW SWSGNGGGVE YLDMVTSFDP
AQRTSWGTRV ITGPDGLAQT SVRAAVFGGG DTGDGDGDDG DGDGDGDGDD GGTEEPTGAC
TAVPRVSNTW QGGYQAEVVV TAAAAIGGWT VSLGVTPTQI WGAALTGQTA SNESWNGSVG
AGTSTTFGFL GSGTPPAAGT VPCAA
|
|---|
| |