Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xcel_0394 |
Symbol | |
ID | 8647897 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylanimonas cellulosilytica DSM 15894 |
Kingdom | Bacteria |
Replicon accession | NC_013530 |
Strand | - |
Start bp | 462732 |
End bp | 464477 |
Gene Length | 1746 bp |
Protein Length | 581 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | |
Product | HhH-GPD family protein |
Protein accession | YP_003324991 |
Protein GI | 269955202 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGTCCGGC TGGAGGCGGA GCGGGACGCC GTCCGGGTGG ACGCGGCGCG CGCCGTGGTG CTGCCGGACG CGGGTCGCCC GGTGGTCCGG GTACCTGCGG ACCGCGCATC GGTCGACGGC GACGCATTCT TCGACGAGGC AGTCTTCGAC GCGGTCTTCG ACGGCGCAGC TTTCGACGTC TTCGCCTTCG ACGGCGTGGC GCCCTTGGAC GACGAGCCCT TCGCCGGCGT CGCAGTCCTC GCGCGCGGCG TCGCGGCACC GGGGGCCTGC AGCCGGTTCA CCGAGACCAC CCGCTGGTCG CTCTTCGCGC TCCGCGCGCG ACCGGTCGCC GGGCCGGACT TCTTCGCCGT CGTCCCGGAC TGTCGGGACG ACGACTGTCC CGCCGCCGAC TTTCCCGAGG CTGGCTTTCC CGACGCCGAC TTTGCCGACG ACTGCCGCGA TGCCGACTGT CGCGCCGACG CTTCGCCCCG GCCCTGGGCC GACTGCCCTC GCCGGCCCGA CCGTGCGGGC GCCGAGCGTT GCGCGGGCGC GGAACGCGAC GTGCTCGAAC CGCGCGGCTC CCCCGAGCTG CGCGACGTGC TCGAACCGCG CGACGACGCC CCGCCTCCGG AGCGCGCGGT CTGCCCGGAA CGCTGCCCCG TCCCGCTCGA ACGCTGCCCG GTTCCGCGCG CGCCGGAGCC GCGGGCGGCG TTGCCGCCCG CAGAGCGCTC ACGGTCGGCG GGTGTCACGG AACCTCCGGT GGGGCGAGGG GTCGGCCACA AGGTACGACG ACGCCGCCGC CGGACCGGGG AGCCGCGCCG CCGGACGTCC CACCGTGCCG CGTCACACGG TTACGGTGTG CCCGTGCCCG CACCCGATCA GCCCCCGGAG CACCCGTCGC GCGCACTGGT CGAGCGCGTC GTCCGCTGGT TCGACGGTGC CCGCCGTGAT CTGCCGTGGC GGGCTGCCGA CCGCACCCCG TGGGGCGTCC TGGTCAGCGA GGTGATGCTG CAACAGACGC CGGTCGTGCG CGTCGAACCC GCCTGGCGGG CGTGGATGGA GCGCTGGCCC ACGCCGTCGG ACCTTGCCGC GGCGAGCACC GCCGACGTGC TGCGCGCCTG GGACCGCCTC GGCTACCCGC GCCGCGCCCT GCGCCTGCAG GAGTGCGCAC GCGTCCTGGT GGAGCGGCAC GACGGTGCGG TGCCCGACGA CGAGGCCGCC CTGCGCGCCC TGCCCGGCGT CGGGGAGTAC ACGGCCGCCG CGGTGCGCGC GTTCGCGTTC GGGCGTCGCG CCGTCGTCGT CGACACCAAC GTGCGCCGGG TCCTGGCGCG CGCGGTGGGC GGCGTCGCGC TGCCCGCTCC CAGCCCGACG GCGGCCGAGC GGGCGACCGC CACCGCCGTC GTACCGCACG ACGACGACGC CGCTGCCGCG TGGGCTGCGG CGTCGATGGA GCTCGGTGCG CTGGTGTGCA CGGCACGGTC GCCGCGGTGC GCGGAGTGCC CGGTGCGCGA TCTGTGCGCG TGGCGGGCGG CGGGGTGCCC CGGCGACGCG CATGCGCACC GCCGCAAGAC CCAGGCCTGG CACGGCACGG ACCGGCAGTG CCGCGGGCGG ATCATGGCCG CGCTGCGTGC GGCCGACGCG GTGCAGGGCC GCGATGCGCT CGGTGCCGCG TCTCCGGACG AGACGCAGGT GGACCGCTGC CTCGTCGGGC TGCTCGCGGA CGGCCTGGTC GTCCGCACCC CGGAGGGCTA CCGCCTCCCT GACTGA
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Protein sequence | MVRLEAERDA VRVDAARAVV LPDAGRPVVR VPADRASVDG DAFFDEAVFD AVFDGAAFDV FAFDGVAPLD DEPFAGVAVL ARGVAAPGAC SRFTETTRWS LFALRARPVA GPDFFAVVPD CRDDDCPAAD FPEAGFPDAD FADDCRDADC RADASPRPWA DCPRRPDRAG AERCAGAERD VLEPRGSPEL RDVLEPRDDA PPPERAVCPE RCPVPLERCP VPRAPEPRAA LPPAERSRSA GVTEPPVGRG VGHKVRRRRR RTGEPRRRTS HRAASHGYGV PVPAPDQPPE HPSRALVERV VRWFDGARRD LPWRAADRTP WGVLVSEVML QQTPVVRVEP AWRAWMERWP TPSDLAAAST ADVLRAWDRL GYPRRALRLQ ECARVLVERH DGAVPDDEAA LRALPGVGEY TAAAVRAFAF GRRAVVVDTN VRRVLARAVG GVALPAPSPT AAERATATAV VPHDDDAAAA WAAASMELGA LVCTARSPRC AECPVRDLCA WRAAGCPGDA HAHRRKTQAW HGTDRQCRGR IMAALRAADA VQGRDALGAA SPDETQVDRC LVGLLADGLV VRTPEGYRLP D
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