Gene Xcel_0335 details

Gene Information

• Locus tag: Xcel_0335
• ID: 8647837
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xylanimonas cellulosilytica DSM 15894
• Kingdom: Bacteria
• Replicon accession: NC_013530
• Strand: -
• Start bp: 393091
• End bp: 393645
• Gene Length: 555 bp
• Protein Length: 184 aa
• Translation table: 11
• GC content: 75%
• Product: RNA polymerase, sigma-24 subunit, ECF subfamily
• Protein accession: YP_003324932
• Protein GI: 269955143

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCGCCT GGGACGAGGA GCTCACCGAG CTCGTGACAC ACCGCGGCCG CGCCCTGGTG 
GGGTACGCGT ACCTGTTGTG CGGCGACGCA CGGCAGGCCG AGGACCTGGT GCAGGACGCC 
CTGGTCAAGG TCTACGCCCG CCTGCGCGGC ACTCCTGGCC CGGCCACAGT TCACCCGCTC 
GACGCCGACG GCCCGCCCCG TCGCGGCACC GAGGCGTACG TGCGCCGCGC GATCCTCACC 
CTGTTCCTCG ACGACCGTCG CCGGCACACC CGCTGGATCG AGCGCCGGCA CCTGGTCGCC 
ACCGAGACCA CCGCACGTGG CCCCGAGTCG GGTGCCACCG CGCGGGCCGA CGTCGCCGCC 
GCACTGACCG GGCTCGCCCC GCGGGAGCGC GCCGCCGTCG TGCTGCGCTA CTTCGAGGAC 
CTCACGGTCC CGCAGGTGGC CGAGGCCATG GGCCTGGCCA CCGGGACCGT GAAGCGCTAC 
CTGTCCGACG CCACCGCCGC GCTGCGCGGC GTGCTGGCCG TGCCCGCAGA CGAAGCCCGA 
GAGGAACGGT CATGA 

 

Protein sequence

MTAWDEELTE LVTHRGRALV GYAYLLCGDA RQAEDLVQDA LVKVYARLRG TPGPATVHPL 
DADGPPRRGT EAYVRRAILT LFLDDRRRHT RWIERRHLVA TETTARGPES GATARADVAA 
ALTGLAPRER AAVVLRYFED LTVPQVAEAM GLATGTVKRY LSDATAALRG VLAVPADEAR 
EERS