| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_0305 |
|---|
| Symbol | |
|---|
| ID | 8647807 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | + |
|---|
| Start bp | 360855 |
|---|
| End bp | 361655 |
|---|
| Gene Length | 801 bp |
|---|
| Protein Length | 266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | 5-oxopent-3-ene-1,2, 5-tricarboxylatedecarboxylase |
|---|
| Protein accession | YP_003324902 |
|---|
| Protein GI | 269955113 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.966001 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGAATCG CGACCGTCAC CACCCCGCAC GGCACCGCCG CCGCGGTCCA GGCCGACGCC
GGCTGGCGCG CGCTGCCCGC CCCGGACCTC TCGGCCCTGC TGGCCGACGG CGACGCCTGG
GAGCCCGGCG ACCTCCTGGC GGACGCGGTA CCGACGCTGC CGCTGCCCCG CCCCGGCAAG
GTGATCTGCT GCGGCCTGAA CTACGGCGAC CACATCGCCG AGATGGGCCG CGACCTGCCC
ACCCACCCGA CCCTCTTCGC CAAGCACGCC GACACGCTGC TCGCCGACGG GCAGGACATC
CGGCTCCCGG CCGGTCTCCA GATCGACTGG GAGGCCGAGC TCGCCGTCGT CGTCGGGCGC
GAGCTGCGGC ACGCCGACGA GGACCAGGCG CGTGCGGCGA TCGCCGGCTA CACCGTCGCC
AACGACATCT CGGTGCGCGA CTGGCAGCGG CGCACGCCGC AGTGGTTCCA GGGCAAGGCC
TGGGACGCCA CCACGCCGCT CGGCCCCGTC GTCGTCACCC CGGACGAGGT CGACCCCGAA
GCAGGGCTCG AGGTGATCTG CCGCGTCAAC GGCGTCGAGC ACCAGCGGGG CAGCACCAAG
ACCCTCGTGT TCTCCAGCGC CGCGCTGCTC GCCTACGTCT CCACGTTCAC CGTGCTGCGG
CCCGGCGACA TCGTGCTCAC CGGGACGCCG GGCGGCGTCG GCATGGGCAT GGAGCCGCCG
GTCTACCTCG CCGACGGTGA CGTCGTCGAG ACCGAGATCC CGGGCATCGG CGCCCTCACC
AACACCGTCC GCCTCGCATG A
|
|---|
| Protein sequence | MRIATVTTPH GTAAAVQADA GWRALPAPDL SALLADGDAW EPGDLLADAV PTLPLPRPGK
VICCGLNYGD HIAEMGRDLP THPTLFAKHA DTLLADGQDI RLPAGLQIDW EAELAVVVGR
ELRHADEDQA RAAIAGYTVA NDISVRDWQR RTPQWFQGKA WDATTPLGPV VVTPDEVDPE
AGLEVICRVN GVEHQRGSTK TLVFSSAALL AYVSTFTVLR PGDIVLTGTP GGVGMGMEPP
VYLADGDVVE TEIPGIGALT NTVRLA
|
|---|
| |