Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xcel_0288 |
Symbol | |
ID | 8647790 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylanimonas cellulosilytica DSM 15894 |
Kingdom | Bacteria |
Replicon accession | NC_013530 |
Strand | + |
Start bp | 344997 |
End bp | 345644 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | NAD-dependent epimerase/dehydratase |
Protein accession | YP_003324885 |
Protein GI | 269955096 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTCGCA TCACCGTCAT CGGAGGCACC GGCCACGCCG GCTCGGCGAT CGTCGCGGAG GCCGCCGGTC GCGGCCACCA GGTCACCGCG CTGAGCCGCT CGCTCCCTGC GGAACCCGTC CCCGGCGTGA CCTACCTCCA AGGTGACGCG ACGGACGAGG CGACGCTGTC GCAGGCGATC GACGGCGCGG ACGTCGTGGC GAGCGCCTAC TCCGCACGGA GTCCGCACGC CCCCAGCCTC CGGGACTTCT ACCGCACGGC CGCTCGCGTG GCCGATACCG CAGGGGTCCC CCTGTACATC GTCGGCGGCT ACTCGTCGCT GCGCCCGGCG CCGGGGGCGG ACCGCTTCGT CACCGACCTC AGCGACATCC CCGCGGAGCT CCACGCGGAG ATCCGCGACG GCGCGCAGCT CATCATCGAG GATCTTCCGG CCACTCCCGC GACGCTCGAC TGGGTCTTCG TCAGCCCGGC GCTCCGGTTC GGCGCCCGGA TGCCCGGCGA GCGGCTCGGC CGCTACCGGC TCGGCGACGA CGTCGCGGTC GAGCCCGACG GTGGTGGCGC CATCTCCGCC GCGGACTACG CCCTCGGGTT CGTCGACCTC ATCGAGAAGG GCGACCATCA CCGGGAACAG GTCAACCTCG GCCATTGA
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Protein sequence | MSRITVIGGT GHAGSAIVAE AAGRGHQVTA LSRSLPAEPV PGVTYLQGDA TDEATLSQAI DGADVVASAY SARSPHAPSL RDFYRTAARV ADTAGVPLYI VGGYSSLRPA PGADRFVTDL SDIPAELHAE IRDGAQLIIE DLPATPATLD WVFVSPALRF GARMPGERLG RYRLGDDVAV EPDGGGAISA ADYALGFVDL IEKGDHHREQ VNLGH
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