| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_0276 |
|---|
| Symbol | |
|---|
| ID | 8647778 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | - |
|---|
| Start bp | 330778 |
|---|
| End bp | 331812 |
|---|
| Gene Length | 1035 bp |
|---|
| Protein Length | 344 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | |
|---|
| Product | ABC transporter related protein |
|---|
| Protein accession | YP_003324873 |
|---|
| Protein GI | 269955084 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAGCG ACGGCGGCAT CCGGGCCCGC GACGTGAGGC GCGCGTTCGG CCAGGTCAAG
GCGGTCGACG GCGTCGACCT GGTGGCACGG CCCGGCCGGG TCACGGCCCT GGTGGGCCCC
AACGGTTCGG GCAAGACGAC GCTGCTGCTC GTGCTCGCCG GGCTCCTCGT GCCCGACGCC
GGTGAGGTCA CCGTCGCAGG CTTCGACCCC GTGACGCAGG GCGTGGAGGC CCGACGCCGC
ACCGGCTGGA TGCCCGACGT CTTCGGCACC TGGGACTCGC TCACCTGCCG CGAGGTGCTG
ACCACGGTGG CGGCCGCCTA CCGCCTGCCC CGCGACGTCG GCGCCGCCCG AGCCGCCGAG
CTGCTCACGC TGGTGCACCT CGACGAGTAC GCCGACGCCC CCGCCCACGT GCTCTCGCGC
GGACAGAAGC AGCGGCTCGG CCTGGCCCGC GCACTGGTGC ACGACCCCGA CGTGCTGCTG
CTCGACGAGC CGGCGTCGGG CCTCGACCCG CGCTCACGGG TGGACCTGCG CGAGCTGGTC
CGCCGCCTCG CGGCGCAGGG CAAGACGGTG CTGATCTCCA GCCACGTGCT CACCGAGCTG
GACGAGATGG CCGACGACGC CGTCTTCCTC TCGCGCGGCC GCACCGTCGC GACCCGGTCG
GTGACCGCCG CCGCGGCGGA GCGCCGCCCC TGGCGGATCA CGGCCCTGGA CACGGTCGCG
CTGCGAGCCT GGCTGGCGGC GAACGGCTAC CTCCCGGCCG CAGGCCCGAC CAGCGGACCT
CGCGACACCC TGGCTCCCGA CGTCACCGGT CCCATCGCCG GTCCCGCCAC CGCGAAGGAC
CCCGGGGAAG GCCCGGACGA AACCCGCGGC GAAGACCCTG GGGAAGGCGG GGTGCTGGTC
GACCTGGACG GTGCCGTCGC CGCCGCCGCC CTGCTGCGCG CCGCCGTCTC CGACGGGGTG
CCGGTCTCGT CGATCGCGCC CGCCGGCGGC GTGCTGGAAC AGGCGTACCT GGCACTCGAG
GAGGAGCGGC GATGA
|
|---|
| Protein sequence | MSSDGGIRAR DVRRAFGQVK AVDGVDLVAR PGRVTALVGP NGSGKTTLLL VLAGLLVPDA
GEVTVAGFDP VTQGVEARRR TGWMPDVFGT WDSLTCREVL TTVAAAYRLP RDVGAARAAE
LLTLVHLDEY ADAPAHVLSR GQKQRLGLAR ALVHDPDVLL LDEPASGLDP RSRVDLRELV
RRLAAQGKTV LISSHVLTEL DEMADDAVFL SRGRTVATRS VTAAAAERRP WRITALDTVA
LRAWLAANGY LPAAGPTSGP RDTLAPDVTG PIAGPATAKD PGEGPDETRG EDPGEGGVLV
DLDGAVAAAA LLRAAVSDGV PVSSIAPAGG VLEQAYLALE EERR
|
|---|
| |