Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xcel_0218 |
Symbol | |
ID | 8647717 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylanimonas cellulosilytica DSM 15894 |
Kingdom | Bacteria |
Replicon accession | NC_013530 |
Strand | + |
Start bp | 259532 |
End bp | 261292 |
Gene Length | 1761 bp |
Protein Length | 586 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | glycoside hydrolase family 18 |
Protein accession | YP_003324815 |
Protein GI | 269955026 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACCGCA GCGTCACCAG CACACGCCAC CAACCCCTGC CCCGCCCCGT CACCGTGCTC CTCGCCGCGA CGACGACGAT CGCCGTCGCC CTCGGCATCA CCACCCTCGG TGCGCAGACG GCCCACTCCG CGCCGCCCGC CGCCGGCACC ACGCCCGCCG TCGGCGCCGC GCCCGACCCC GACGGCATCA ACGGCTTCCG CACCATCGGA TACTTCCCCG GCTGGGTACC GCCGTCGGGC GGCTACCAGG TCGCCGACCT CGAACGGACC GGCGCCGTCG ACGACCTCAC GCACCTCAAC TACGCGTTCG GCAACGTCAC GTCGGACCTC ATCTGCGACA TCTCCGACGC CGTCGGGCCC GAAGGGCCAG AAGGCGACCC GAACGCGGAC TACCTGCGGC TCGTCCCGAA GAACCAGTCC GTCGACGGCG TCGCCGACCG CGCCGACCAG CCGCTCGCCG GCAACCTCAA CCAGCTCCGC AAGCTCAAGG AACGCCACCC CGACCTCAAG ATCCTCATCT CGCTCGGCGG CTGGACCTGG TCCGACCACT TCTCCGACGC CGTCGCCACG CCCGAGAACC GGACGCGCCT CGTCGAGTCC TGCGTCGACC TGTGGATCCG CGGCAACCTG CCCGTCTACG GCGCCCAGGG AGGCGACGGC GTCGCCGCCG GCATCTTCGA CGGCATCGAC ATCGACTGGG AGTGGCCCGG GGCCGACGGC GAGCACCCCT CGCCGCGACC CACCGAGGAC GCCGCCAACT TCCTGTCGTT CATGGAGGAG CTGCGGGGAG CGCTCGACGT CGAAGAGGCC GAGACCGGGC ACGACTACCT CATCAGCGGG TTCGCGCCCG CCGGCTGGGC GCCGCGCACC AACGGCGGCT GGGTGGACCC ACGGCTCGCC GCCGTCGTCG ACTACGTCAA CGTGCAGGGC TACGACTACC ACGGCACCTG GGTGCCGGAC CGCACCGGCC ACCAGGGCAA CCTGCACAAG TACTACTGGC CCGACTCCAC CGGCGAGTAC GCCAACTGGG ACCTGGCCGC CGACGACCTG CTCGCCGCCT ACCGTTCGGC CGGCTACCGC GGCGACCAGG TCAACCTCGG GCTCGCCGCC TACGGGCAGG GCTGGAGCGG AGTCACCTCC CCGGTGCCCG GCTCCCCGGC CACCGCCGGG CTCGGAACCC GCACCTACGC CGAGCTCCGC TCGCTCGGCA CGGAGTACTA CGACGCCGAC GCAGGTGCCG CCTACCGCTG GGACGGCGAC CAGTGGTTCA GCCTCGACAC CCCACGATCC GTGACCGACA AGGCCGAATG GGTGGCCGTC AACGGATACG GCGGCGGGTT CATCTGGGAC ATCACCGGCG ACTACCGCAA CGAGCTCGCG GGGGCGCTCG CGGGCACCCT CCGCGCGGCG ACGCCTGGTC CGCTCGCGAC GCCGTCGGGT GCGGCGCCCT GGTACTCGAC CGGGGTGTAC ACGGCGGGCG ACGTCGTCGT GCACGACGGT GTCGAGTTCG CCGCGGCCTG GTGGACGCGC GGCCAGGAGC CGGGCGCGAC GCCTTACGGG CCGTGGGTGC CGACCGGGAC TACCACGCCC GTGGTCACCC CGCCGGCGTG CGCGCCCGCC TGGTCGGCCG ACGCCGTCTA TACGACCGGC GACGTCGTCT CGCGGGCCGG CGTGAACCAC GTCGCGCTCT GGTGGACGCG CGGTCAGGCG CCCGGGACGG ACACCTGGGG GCCGTGGGAC GCGTCCCGAC CCTGCACGTA G
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Protein sequence | MHRSVTSTRH QPLPRPVTVL LAATTTIAVA LGITTLGAQT AHSAPPAAGT TPAVGAAPDP DGINGFRTIG YFPGWVPPSG GYQVADLERT GAVDDLTHLN YAFGNVTSDL ICDISDAVGP EGPEGDPNAD YLRLVPKNQS VDGVADRADQ PLAGNLNQLR KLKERHPDLK ILISLGGWTW SDHFSDAVAT PENRTRLVES CVDLWIRGNL PVYGAQGGDG VAAGIFDGID IDWEWPGADG EHPSPRPTED AANFLSFMEE LRGALDVEEA ETGHDYLISG FAPAGWAPRT NGGWVDPRLA AVVDYVNVQG YDYHGTWVPD RTGHQGNLHK YYWPDSTGEY ANWDLAADDL LAAYRSAGYR GDQVNLGLAA YGQGWSGVTS PVPGSPATAG LGTRTYAELR SLGTEYYDAD AGAAYRWDGD QWFSLDTPRS VTDKAEWVAV NGYGGGFIWD ITGDYRNELA GALAGTLRAA TPGPLATPSG AAPWYSTGVY TAGDVVVHDG VEFAAAWWTR GQEPGATPYG PWVPTGTTTP VVTPPACAPA WSADAVYTTG DVVSRAGVNH VALWWTRGQA PGTDTWGPWD ASRPCT
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