| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_0145 |
|---|
| Symbol | |
|---|
| ID | 8647640 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | + |
|---|
| Start bp | 153135 |
|---|
| End bp | 154157 |
|---|
| Gene Length | 1023 bp |
|---|
| Protein Length | 340 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | ABC transporter related protein |
|---|
| Protein accession | YP_003324743 |
|---|
| Protein GI | 269954954 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCATCC CCATCGAGAT CCGCGACCTG CACAAGTCGT TCGGCACCAC GAAGGCGCTG
GACGGCCTGG ACCTGACCGT CGAGCAGGGG CAGGTGGCCG GCTTCCTCGG CCCGAACGGC
GCCGGCAAGT CGACCACGAT CCGCGTGCTG CTGGGCCTGC TGAAGGCCGA CTCGGGCGAC
GTGCGACTGC TCGGCGGCGA CCCGTGGCGC GACGCCGTCG ACCTGCACCG GCGCCTCACC
TACGTGCCCG GCGACGTCTC CCTGTGGCCG AACCTCACCG GCGGGGAGGC GATCGACCTG
CTCGCCCGCC TGCGCGGCGG GCTGGACAAG GCGCGCAAGG CGGAGCTGCT GGAACGCTTC
GAGCTCGACC CCACCAAGAA GGCCCGCACG TACTCCAAGG GCAACCGGCA GAAGGTCGCG
CTCGTCGCCG CGCTCGCCTC CGACGCCGAG CTGCTCATCC TCGACGAGCC GACGTCGGGC
CTCGACCCGC TGATGGAAGC CGTGTTCACG GACTACCTGC GCGAGGTCAA GGCCCGGGGC
CGCTCGGTGC TGCTGAGCTC GCACATCATG AGCGAGGTCG AGAAGGTGTG CGACACCGTC
ACCATCATCC GAAGCGGCAG GTCGGTCGAG CACGGCACGC TGGACGACCT GCGCCACCTC
ACCCGCTCCG CGGTCTCGGT GCTGCTGCCC GACGACGATG CCGTGCGCAC CGTGTCCGGC
CTGCCGGGGG TGCACGACGT CGTCGCCGAG CCCGGGGCCG ACGGCGTGGT GCGGCTGCGC
GCCTCGGTGG ACAACGACCA CATGACGGGC GTGCTGGCGT CGCTCGGCGC GATCGGCGTG
CGGGGGTTCA CAGCGACACC ACCGTCGCTG GAAGAGATGT TCATGCGCCA CTACGGCGAC
GAGCTCCCCA CCCCACCCCC TCCGGTGGTT GAGCCTGTCG AAACCACCCC ACCCCCAGCG
GCTGAGCCGC ATCCGGTGGT TGAGCCTGTC GAAACCACCC CCGAGCGCGG AGAAGCCCGA
TGA
|
|---|
| Protein sequence | MTIPIEIRDL HKSFGTTKAL DGLDLTVEQG QVAGFLGPNG AGKSTTIRVL LGLLKADSGD
VRLLGGDPWR DAVDLHRRLT YVPGDVSLWP NLTGGEAIDL LARLRGGLDK ARKAELLERF
ELDPTKKART YSKGNRQKVA LVAALASDAE LLILDEPTSG LDPLMEAVFT DYLREVKARG
RSVLLSSHIM SEVEKVCDTV TIIRSGRSVE HGTLDDLRHL TRSAVSVLLP DDDAVRTVSG
LPGVHDVVAE PGADGVVRLR ASVDNDHMTG VLASLGAIGV RGFTATPPSL EEMFMRHYGD
ELPTPPPPVV EPVETTPPPA AEPHPVVEPV ETTPERGEAR
|
|---|
| |