Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xcel_0113 |
Symbol | |
ID | 8647608 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylanimonas cellulosilytica DSM 15894 |
Kingdom | Bacteria |
Replicon accession | NC_013530 |
Strand | - |
Start bp | 122704 |
End bp | 123756 |
Gene Length | 1053 bp |
Protein Length | 350 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | |
Product | transcriptional regulator, LacI family |
Protein accession | YP_003324712 |
Protein GI | 269954923 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCGAGTG ACCCTCGCCG TCGGCGCGCC ACCCATGCCG ACGTCGCCGC CGCTGCCGGC GTCTCCAAGG CGACCGTCTC CAAGGCGCTC AACGGCCGCG ACGACGTGTC GGCCACGACC CGCGAGCGTG TCCTGACCGC TGTCACCGAG CTCGGCTACC GCCCGACGAC GGCGCCCGCG ACCACCTCGG GCCGGCGGGC TCTGGCCGTC GTCTTCGACA TCCCCGCGTC GCCCTACATC CTGGGCGTCC TCCAGGGTGC GCTCGCCGCG GCCAGCGACG GGCACCTCGA CCTGCTCACG CGGCTCGCCC CCGAGCGGTC CGCACGCACC CAACGGGCCG TCGCCCGCGA GTGGATCGCC GACCAGCGCG CAGCCGGCGT CGTCGGCATC GTGGGGCTCA CGCTCTCGGA GCCGGACGGG CTCATCGACG CCGCGAGCGA CGCCAGCCTG CCGTTCGTCA TCGTCGACCC GGTGGACACC CGCCACCGCC GCATGGTGAG CGTCGGTTCG AGCAACTGGG CCGGAGCACG CACCGCGACC GAGCACCTCC TCGGCCTCGG CCATCGGCGC ATCGCGTGGA TCGGCGGTCC GGAGGCGTCC GACGCGGCCC GCGACCGGCT CTACGGCTAC CAGGCTGCGC TCGACGCCGC CGGACTCGAG GTCGACCCCG CCCTCATCCG GTCGGACCAG TTCGACGTGT CCGTCGGTGC CCGGCACGCG CGCGAGCTCC TCACCGCGGC CGAACCGCCC ACCGCGATCA TGGCGGCCGA CGACGAGATC GCCGTCGGCG TGCTCGCCAC AGCTCACGCG CTCGGCATCC GGGTGCCGGA CCAGCTCAGC GTCACCGGCT TCGACGACAC ACCGCAGGCG GCGTGGACGA CGCCGCCGCT GACGACCGTC CACCAGCACC TCGAGGGCAT GGGACGGATG GCGGTCCAGA CCGTCCTCGC GATGGCAGAG GGACGCCGCC CCGCGTCGCG CCACGTCGAG CTCGCCACGT CCCTGACTGT CCGCGACAGC ACGAGCGCGC CGGCCTCCGC CGCCCGCACC TGA
|
Protein sequence | MSSDPRRRRA THADVAAAAG VSKATVSKAL NGRDDVSATT RERVLTAVTE LGYRPTTAPA TTSGRRALAV VFDIPASPYI LGVLQGALAA ASDGHLDLLT RLAPERSART QRAVAREWIA DQRAAGVVGI VGLTLSEPDG LIDAASDASL PFVIVDPVDT RHRRMVSVGS SNWAGARTAT EHLLGLGHRR IAWIGGPEAS DAARDRLYGY QAALDAAGLE VDPALIRSDQ FDVSVGARHA RELLTAAEPP TAIMAADDEI AVGVLATAHA LGIRVPDQLS VTGFDDTPQA AWTTPPLTTV HQHLEGMGRM AVQTVLAMAE GRRPASRHVE LATSLTVRDS TSAPASAART
|
| |