| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_0065 |
|---|
| Symbol | |
|---|
| ID | 8647560 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | + |
|---|
| Start bp | 70488 |
|---|
| End bp | 71468 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_003324664 |
|---|
| Protein GI | 269954875 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGACGA CGCCCGCTCC CGCGCCCGAC GCCGTCGCCC CTGCGGCGGC CGCGACCGTC
CCCGCCTCCG TGACCCGCAA TGCCTCGCGC GGCTCAAGAC CGTCCGGCGA CCGCACCGCG
GTCTCCGTCT CCGACTGGCG GCGCCCCTCG GTGCGCTGGG GGCTCGGCAC GTCCCAGATC
GTCCTGCTCG TGCTCCTCGT CGTCGTCGGG CTCGGGCCGC TGCTCCTCCT CGCCCGGTTC
GCCGTCACGC CGACGCAGGA CATCCTGCGC ACCCCGATGG ACATCTTCCC GAACGGGATC
GCCTGGTCGA ACCTCGACAC GGCGTGGAAC GACGTCCAGA TCAGCCGGTA CTTCCTCAAC
ACCGTGTGGC TCGCCGCCGG GTCGTGGGCG TCGCAGCTGC TCGTCGCGAC CACCGGCGGG
TACCTGCTGT CCGTGCTGCG TCCGGCCTAC GGCAAGGTGG TCGAGGCGCT CGTGCTGGCC
ACGATGTTCA TCCCCGCCGT CGTGCTGCTC GTGCCGCTGT ACCTGACCGT GCTCGACCCG
CCGCTGCTGC GGTCCTCGCT CATCAACAGC TTCTGGGCGG TGTGGCTGCC CGCGGGAGCC
TCCGCGTTCA ACGTGCTGCT GGTGCGCCGG TTCTTCGACT CGCTGCCCCG CGAGGTGTTC
GAGGCCGCCC GCGTGGACGG GGCCGGGCCC TACCGGCTGT TCTGGTCCGT GGTGCTCCCG
ATGTCGAAGC CGATCCTGGG CGTCGTGTCG GTGTTCGCGA TCATCGCGAG CTGGAAGGAC
TTCCTCTGGC CGTTGCTCGT GCTCCGCGAC CCGGCGATCC AGCCGCTCTC CGTGCGGCTC
CCGTCGATCC AGGGCACGAC GGACCTGGGC GTCTTCCTCG CCGCGCTGGC CATCGCGACC
GTCATCCCGA TCGTGCTGTT CCTCGTGTTC CAGCGGCTGT TCCTGTCCTC CGCCGGGCTG
GGCGGGGCGG TCAAGGGCTG A
|
|---|
| Protein sequence | MTTTPAPAPD AVAPAAAATV PASVTRNASR GSRPSGDRTA VSVSDWRRPS VRWGLGTSQI
VLLVLLVVVG LGPLLLLARF AVTPTQDILR TPMDIFPNGI AWSNLDTAWN DVQISRYFLN
TVWLAAGSWA SQLLVATTGG YLLSVLRPAY GKVVEALVLA TMFIPAVVLL VPLYLTVLDP
PLLRSSLINS FWAVWLPAGA SAFNVLLVRR FFDSLPREVF EAARVDGAGP YRLFWSVVLP
MSKPILGVVS VFAIIASWKD FLWPLLVLRD PAIQPLSVRL PSIQGTTDLG VFLAALAIAT
VIPIVLFLVF QRLFLSSAGL GGAVKG
|
|---|
| |