Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xcel_0062 |
Symbol | |
ID | 8647557 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylanimonas cellulosilytica DSM 15894 |
Kingdom | Bacteria |
Replicon accession | NC_013530 |
Strand | + |
Start bp | 66387 |
End bp | 68048 |
Gene Length | 1662 bp |
Protein Length | 553 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | alpha amylase catalytic region |
Protein accession | YP_003324661 |
Protein GI | 269954872 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.3547 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGACGT CGTCACCCTC CGCTCCCGAC CCGCACGCCT GGTGGCGCCA CGCGGTGATC TACCAGATCT ACCCGCGCAG CTTCGCCGAC GGGAACGGTG ACGGCACGGG CGACCTTGCC GGGGTGCGTG GCCGCCTTCC GTACCTCAAG GAGCTCGGCG TCGACGCCGT CTGGTTCACG CCCTGGTACG TCTCCCCGCT CGCCGACGGC GGCTACGACG TCGCCGACTA CCGCGCGATC GATCCCCAGT TCGGCACCCT CGCGGAGGCC GAGGCGCTCA TCACGGAGGC CGCCGCACTG GGCATCCGGA CGATCATCGA CGTCGTCCCC AACCACGTCT CCTCCGCGCA CGCCTGGTTC CAGGCCGCCC TGGCGTCCGA GCCCGGCTCC CCGGAGCGGG CCCGCTTCTG GTTCCACGAC GGCCTGGGCC CCGACGGCTC CGGCATGCCC ACCCACTGGC AGTCCAGCTT CCAGGGCACG ACGTGGACCC GCACGACCCG CCCGGACGGC ACGCCTGGCC AGTGGTACCT GCACCTGTTC ACGCCCGAGC AGCCCGATCT CAACTGGGAG AACCCGGACG TCCGTCAGGA GCACCTCGAC GTGCTGCGGT TCTGGTTCGA CCGCGGGGCC GCCGGCGTCC GCATCGACTC CGCGGCGCTG CCGGTCAAGG ACCGCGCGCT GCCCGAGGTG CCCGAGATCC ACGGCCCGGG CGAGCACCCG CACCTGGACC GCGACGAGCT GCACGACATC TACCGCACGT GGCGGGCCGT GGCCGACGGC TACGACGACC CGCGGATCCT GGTGGGCGAG GTGTGGCTGC CGGACGCGGA GCGGTTCGCG CAGTACCTGC GCCCCGACGA GATGCACACG GCGTTCAACT TCGACTTCAT GGTGCGCCCC TGGGCCGCCG CCGCGATGCG CGAGTCCATC GACACCACGC TCGCCGCGCA CGCCCCGGTG GACGCGCCCG CCACCTGGGT GCTGTCCAAC CACGACATCA CGCGCCCCGT GACCCGGTAC GGCCGCGAGG ACTCGTCGTT CGACTTCGCG CGCAAGCGGT TCGGCATCCC CACCGACGTC GCCGTCGGCA CGCGGCGGGC CCGTGCGGCC GCCCTGCTCA CGGGAGCGCT GCCGGGCGCC CTGTACGTCT ACCAGGGCGA CGAGCTCGGC CTGCCCGAGG TCGAGGACCT GCCGCTCGAC GTGCTCCAGG ACCCGATGCA CTTCCGCTCG AACGGCGTCG ACCCCGGCCG CGACGGCTGC CGCGTGCCGC TGCCGTGGAA CCGCTCCGGG GCCTCGTACG GGTTCGGTCC GGAGCGCCCG GGCTCGGACC GCGCCGAGAA GCCCTGGTTG CCCCAGCCGG TCTGGTGGGG CGAGTACGCC GTCGAGGCCC AGGAGCACGA TCCCGCCTCG ATGCTGACGC TCTACCGCAC GATGCTGCGC CTGCGGCGCA GCCTGCCCGA CCTGGCCGCC GGCGCCTTCA CCTGGATCGA GGACGCCGGC GCCGACGTCC TCGCCTTCCG TCGCGGCGCG GGCTTCGCCT GCGTCGTCAA CCTCGGTGCC ACGCCCGCCG CACGGCCCGA CGGCGAGATG CTCCTCGCCA GCGGGCCGCT CGCCCCGGAC GGCGCGGTGC CGCACGACAC CGCCGTCTGG CTCCGGCTCT GA
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Protein sequence | MTTSSPSAPD PHAWWRHAVI YQIYPRSFAD GNGDGTGDLA GVRGRLPYLK ELGVDAVWFT PWYVSPLADG GYDVADYRAI DPQFGTLAEA EALITEAAAL GIRTIIDVVP NHVSSAHAWF QAALASEPGS PERARFWFHD GLGPDGSGMP THWQSSFQGT TWTRTTRPDG TPGQWYLHLF TPEQPDLNWE NPDVRQEHLD VLRFWFDRGA AGVRIDSAAL PVKDRALPEV PEIHGPGEHP HLDRDELHDI YRTWRAVADG YDDPRILVGE VWLPDAERFA QYLRPDEMHT AFNFDFMVRP WAAAAMRESI DTTLAAHAPV DAPATWVLSN HDITRPVTRY GREDSSFDFA RKRFGIPTDV AVGTRRARAA ALLTGALPGA LYVYQGDELG LPEVEDLPLD VLQDPMHFRS NGVDPGRDGC RVPLPWNRSG ASYGFGPERP GSDRAEKPWL PQPVWWGEYA VEAQEHDPAS MLTLYRTMLR LRRSLPDLAA GAFTWIEDAG ADVLAFRRGA GFACVVNLGA TPAARPDGEM LLASGPLAPD GAVPHDTAVW LRL
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