Gene Tter_2425 details

Gene Information

• Locus tag: Tter_2425
• ID: 8640454
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermobaculum terrenum ATCC BAA-798
• Kingdom: Bacteria
• Replicon accession: NC_013526
• Strand: +
• Start bp: 572754
• End bp: 574739
• Gene Length: 1986 bp
• Protein Length: 661 aa
• Translation table: 11
• GC content: 52%
• Product: CRISPR-associated protein, Csh1 family
• Protein accession: YP_003324142
• Protein GI: 269839450

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.000000024331
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGATCGAGA GCATTTACCA GATAGGGGAA GCCGTGCGCA AAGAAGGCCA GGGTACACGC 
GCTTTCTTGG AGTCGCTGGC TGTCGAGGTG CCTCCTGTCA AAAAGGGCTC GGCACACATA 
GCTATATTCG ACTTCAATCT AGAATCGGGA AAAGTTAAGG TAGAGCTTAG AGAGGCCGGC 
CGAGAAACGC CCCAGAGATA CCTTTGGATA GGTAATGCCT CGGGGATGAA CGACCAGGAC 
AGAGTAACCA CGAAGGATCT CAAGTACTTA GTGTCCCAGA TAGTGCCAAA CCTGTTGTTG 
GGAGCCAGGT TGTCCGATCA CTGTCCTCTG CGTGAAAAGC TGCAGCAGCT TGTAGACGTC 
TTTTACCTCG ACATTGGGGA AGCCTATGAG CTGGGTCTGC CTATGGACAG TGGCTACCGC 
CGGTACAGAA GGCTATGGGA CCTAAACAGG ATGGGTAAGG AAGGTCCGGA CCTAGAGGCT 
TTGCGAGAGC TTGCTAAGCA AAATGGGGAT GCTAAGGCAT TACCGGAGGT AGTAGCTCAG 
GCTGTGATAA AGGCTTTTGG CCTCGATAGT ACTGTTGTGC TATTCACACT CTCAATAGAT 
GGTGAGTTAG TGGTTGATGA CCCTGATTAT CAGGCTTACT TAGAAAGGTC CTATATAGAG 
GATGCTTTCG AGGATCCTCT TGAGGGTGTA TGTTACCTGA CGGGCAAGAG AGGACAGGTA 
ACCACGGATA TGACCAAGTT TAAATTTAAA TATTACATCA CCGATAAGCC TGGATTCGCA 
TCTGGTGCTA CCAAGAAGGG GTTTATGTCG AATCTAACTA TAGGCAAAGA AGCCTATGTG 
TCGTTGCTTG TAGGTGAAAG GTTTATACAG CGATATCTAG GATTCAGGTT GCAGAGTATA 
GGCGCCAACG GGTACGTAAT TCCGGATGTC TTTACAAATG AGCTCTCAAA TAGGTATGCC 
CGTAACCTCC TGATATCTAT CCAGGATTTG AAGCGGAAAG TAGATTATGA CCTTGGACTG 
CAGGATCGTG TGGACTTAGT CCTAAGCAAT GAGAGAAGTT TTGGAAGCTA CATGGTCAAT 
CTTCTCTTTT ATAAGCAGAG CAAGGAAAAC TTCAAGGTGC TTCGCCTCAT ACAAGATGTG 
CCCGAGTACA GGCTGCAGGA GATCAGGCGT GCCTTGGACG ATATCTCGGA GCTGTTCCCC 
GAGCTGTACG GCTTCCGCTA CGGACTAACC CTGAGCAACC TTGGATGGCT GCTGCCGGTG 
CGCAAGAGCG GTACCGACCT GCTGGTCAAA TCCGTGCTCG ATTTCTACTC CTCGATCATA 
GAGGGCGGGG TGCTGGAGAG GCGGGAGCTG GTCGAGGCGT TCCTAGAGCT GGTGCGGGTC 
TATATGTTCG GCAACCCCAA CTACCAGGTG AGCATCCCCA AGGATGACGA GCGAGATTGG 
ACGGTACTGA GATACCTGGC ACAAACGAAC GTACTGCTGG CCTTCCTTAG GAGCATGGGC 
CAGTTGAAGG AGGAAGAGAT GGACCAAGGT TATCTACAAG ACCTCATGCT CTTGGACGAG 
CAGAGGGAGT ACCTCTCGCG CCTGAGGTAC ACCCCTCAGC AGACAGCGCT CTACCTGTTG 
GGCACGATCA TGGCCGACAT AGCCAGAGAG CAGGCGACCA TGGGGGGTGA GAACGGCTCG 
GGTGAGAAGG TTATCCTGAA CAAGCTCAAC TACGAGGGTA TGACCCTGCA GCGCGTGCAG 
CGCCTGGCGG TCGAGCTGTT CGACAAGATG AGGCAGTACA AAGTGCTCAC CCCCTGGAAC 
GAGCAAGCCT TCGCTCAGGC ACAGGGCCTG TTGAGCGAGT ACGCCTCTCG TTGGAATCTC 
ACCCCCGCCG AGAACGTATA CTACATCCTC AGCGGGTACA GCCACTCCAC CCTCCAGGCC 
ATGAAGCATG CCCGGTCCCG CTCGAGGGAG GGGGCACAAG CCATAACTAC ATTGAATGGG 
GAGTAA 

 

Protein sequence

MIESIYQIGE AVRKEGQGTR AFLESLAVEV PPVKKGSAHI AIFDFNLESG KVKVELREAG 
RETPQRYLWI GNASGMNDQD RVTTKDLKYL VSQIVPNLLL GARLSDHCPL REKLQQLVDV 
FYLDIGEAYE LGLPMDSGYR RYRRLWDLNR MGKEGPDLEA LRELAKQNGD AKALPEVVAQ 
AVIKAFGLDS TVVLFTLSID GELVVDDPDY QAYLERSYIE DAFEDPLEGV CYLTGKRGQV 
TTDMTKFKFK YYITDKPGFA SGATKKGFMS NLTIGKEAYV SLLVGERFIQ RYLGFRLQSI 
GANGYVIPDV FTNELSNRYA RNLLISIQDL KRKVDYDLGL QDRVDLVLSN ERSFGSYMVN 
LLFYKQSKEN FKVLRLIQDV PEYRLQEIRR ALDDISELFP ELYGFRYGLT LSNLGWLLPV 
RKSGTDLLVK SVLDFYSSII EGGVLERREL VEAFLELVRV YMFGNPNYQV SIPKDDERDW 
TVLRYLAQTN VLLAFLRSMG QLKEEEMDQG YLQDLMLLDE QREYLSRLRY TPQQTALYLL 
GTIMADIARE QATMGGENGS GEKVILNKLN YEGMTLQRVQ RLAVELFDKM RQYKVLTPWN 
EQAFAQAQGL LSEYASRWNL TPAENVYYIL SGYSHSTLQA MKHARSRSRE GAQAITTLNG 
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