Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tter_2422 |
Symbol | |
ID | 8640451 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobaculum terrenum ATCC BAA-798 |
Kingdom | Bacteria |
Replicon accession | NC_013526 |
Strand | + |
Start bp | 568469 |
End bp | 569614 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | type III effector Hrp-dependent outers |
Protein accession | YP_003324139 |
Protein GI | 269839447 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.242091 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTGGTACG CGATCGTGGC TGACGACCTG ACCGGTGCCG CCGACAGTGC GGCTAGATGC CTGCCAAGCG GCCTGCGGGC GCGGGTGAGC ATAGGCGGAG ATGCCTCAGC TTGGTACGAC GTCGAGGCGT TCGACACCGA CACCCGCCAC CTTCCCCCGG CTATGGCGAG CGAGATCGTT GCCGGGGTTG TGGAGCACTG CCTGCGGATG GGGGCCGTTG AGGTGTACAA GAAGGTGGAC TCGGTCCTGA GGGGGAACGT AGGCGCCGAG CTCGAGGCCG CCATGCGGGC GGCCGGCGCG GAGCTCGTCC TGCTCTGCCC GGCCTTCCCT GAGCAGGGCA GGACTGTGGT CGAAAGCCAT CTCCTGGTGA ACGATACGCC CGTGACTGCT ACTTCCCTGG GACGCGAGGT GGGAGCTTCC AGCTACGTCC CGGAGATCCT CGGGGCGCAG ACTTCGCTGC CGGTGGGGCT GCTAGGGCTG CGGAGCGTGC GCAGTGGCCG TGAGGTGATC GTCCAAGAGC TGGAGGCGTT GAGGCGATCG GGCGCTAGGA TCGTCGTGGC CGATGCCTGC TCCGGCGAGG ACCTCGCGGC TGTAGCCGAC GGAGCACGGG CCCTGGGCCG CAGCTGCCTG CTTGCCGGCT CCGCGGGGCT GATCTCAGTA CTCGCTCCTC ATTGGGCCCG GGCGCTGCCG CCGCCTCAAG TGCTTGTGGT AGTGGGCTCG CTGCACCCTA CCGCCCGGGC GCAGGTGCGG CTGCTTCTGG AGAAGGAGTC CTGCGCGCTG GTGCACACTG GGAATGATGA GGAGCCCGAC GACTCCAGCA GGGTGATCGT CCTCCTCACC CCGGATGAGG GCACGGAGGG GGATCATGTT GGAGAGCTGG CGAAGCGGGC CGCGCAGGTA CTGCGCTCGC GCCGGGTATC TGGGATGGTG GTCACCGGCG GCGACTCGGC GAGGGCCGTC CTAGAGGCCA TCGGGGCCTC AGGAGTAGCG CTGCTGGGCG AGGTCGTGCC AGGCTTGCCC TGTGGACGCC TGGTCGGCGG GGATTACGAC GGCCTGCCGG TGGTGACTAA GGCTGGCAGT TTTGGTCGAG AGGAGGCACT GTGGTGGGGA GTGATCAAAG TGGAGGAGAT GATTGGTGAG AGATAG
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Protein sequence | MWYAIVADDL TGAADSAARC LPSGLRARVS IGGDASAWYD VEAFDTDTRH LPPAMASEIV AGVVEHCLRM GAVEVYKKVD SVLRGNVGAE LEAAMRAAGA ELVLLCPAFP EQGRTVVESH LLVNDTPVTA TSLGREVGAS SYVPEILGAQ TSLPVGLLGL RSVRSGREVI VQELEALRRS GARIVVADAC SGEDLAAVAD GARALGRSCL LAGSAGLISV LAPHWARALP PPQVLVVVGS LHPTARAQVR LLLEKESCAL VHTGNDEEPD DSSRVIVLLT PDEGTEGDHV GELAKRAAQV LRSRRVSGMV VTGGDSARAV LEAIGASGVA LLGEVVPGLP CGRLVGGDYD GLPVVTKAGS FGREEALWWG VIKVEEMIGE R
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