Gene Tter_2422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTter_2422 
Symbol 
ID8640451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobaculum terrenum ATCC BAA-798 
KingdomBacteria 
Replicon accessionNC_013526 
Strand
Start bp568469 
End bp569614 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content68% 
IMG OID 
Producttype III effector Hrp-dependent outers 
Protein accessionYP_003324139 
Protein GI269839447 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.242091 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTGGTACG CGATCGTGGC TGACGACCTG ACCGGTGCCG CCGACAGTGC GGCTAGATGC 
CTGCCAAGCG GCCTGCGGGC GCGGGTGAGC ATAGGCGGAG ATGCCTCAGC TTGGTACGAC
GTCGAGGCGT TCGACACCGA CACCCGCCAC CTTCCCCCGG CTATGGCGAG CGAGATCGTT
GCCGGGGTTG TGGAGCACTG CCTGCGGATG GGGGCCGTTG AGGTGTACAA GAAGGTGGAC
TCGGTCCTGA GGGGGAACGT AGGCGCCGAG CTCGAGGCCG CCATGCGGGC GGCCGGCGCG
GAGCTCGTCC TGCTCTGCCC GGCCTTCCCT GAGCAGGGCA GGACTGTGGT CGAAAGCCAT
CTCCTGGTGA ACGATACGCC CGTGACTGCT ACTTCCCTGG GACGCGAGGT GGGAGCTTCC
AGCTACGTCC CGGAGATCCT CGGGGCGCAG ACTTCGCTGC CGGTGGGGCT GCTAGGGCTG
CGGAGCGTGC GCAGTGGCCG TGAGGTGATC GTCCAAGAGC TGGAGGCGTT GAGGCGATCG
GGCGCTAGGA TCGTCGTGGC CGATGCCTGC TCCGGCGAGG ACCTCGCGGC TGTAGCCGAC
GGAGCACGGG CCCTGGGCCG CAGCTGCCTG CTTGCCGGCT CCGCGGGGCT GATCTCAGTA
CTCGCTCCTC ATTGGGCCCG GGCGCTGCCG CCGCCTCAAG TGCTTGTGGT AGTGGGCTCG
CTGCACCCTA CCGCCCGGGC GCAGGTGCGG CTGCTTCTGG AGAAGGAGTC CTGCGCGCTG
GTGCACACTG GGAATGATGA GGAGCCCGAC GACTCCAGCA GGGTGATCGT CCTCCTCACC
CCGGATGAGG GCACGGAGGG GGATCATGTT GGAGAGCTGG CGAAGCGGGC CGCGCAGGTA
CTGCGCTCGC GCCGGGTATC TGGGATGGTG GTCACCGGCG GCGACTCGGC GAGGGCCGTC
CTAGAGGCCA TCGGGGCCTC AGGAGTAGCG CTGCTGGGCG AGGTCGTGCC AGGCTTGCCC
TGTGGACGCC TGGTCGGCGG GGATTACGAC GGCCTGCCGG TGGTGACTAA GGCTGGCAGT
TTTGGTCGAG AGGAGGCACT GTGGTGGGGA GTGATCAAAG TGGAGGAGAT GATTGGTGAG
AGATAG
 
Protein sequence
MWYAIVADDL TGAADSAARC LPSGLRARVS IGGDASAWYD VEAFDTDTRH LPPAMASEIV 
AGVVEHCLRM GAVEVYKKVD SVLRGNVGAE LEAAMRAAGA ELVLLCPAFP EQGRTVVESH
LLVNDTPVTA TSLGREVGAS SYVPEILGAQ TSLPVGLLGL RSVRSGREVI VQELEALRRS
GARIVVADAC SGEDLAAVAD GARALGRSCL LAGSAGLISV LAPHWARALP PPQVLVVVGS
LHPTARAQVR LLLEKESCAL VHTGNDEEPD DSSRVIVLLT PDEGTEGDHV GELAKRAAQV
LRSRRVSGMV VTGGDSARAV LEAIGASGVA LLGEVVPGLP CGRLVGGDYD GLPVVTKAGS
FGREEALWWG VIKVEEMIGE R