Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tter_2351 |
Symbol | |
ID | 8640380 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobaculum terrenum ATCC BAA-798 |
Kingdom | Bacteria |
Replicon accession | NC_013526 |
Strand | - |
Start bp | 503184 |
End bp | 504929 |
Gene Length | 1746 bp |
Protein Length | 581 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003324072 |
Protein GI | 269839380 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.589414 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGAGATCCA CCAGGAAGCT GTTGAGGTTC ATTCGCCCCT ACTGGCTGTG GGCGCTGCTC GCTCCCCTGT CGATGATCCT GGAGGTGCTG ATGGACCTGC TGCAGCCCAG GCTGGTGCAG CAGATCATCG ACGAGGGCAT ACTGCGCTCG GACATGCGCA CGGTGACCCA CACGGGCCTG CTGATGGTCG TCGTGGCGGT GGTTGGCCTG GCGGGGGGCA TGGCCTGCAC GGTGTTTGCA TTCCTTGCCT CGATGGGGAT GGGCGCGGAC CTGCGCGCCG AGCTGTTCCG CAGGGTGCAG AGCTTCTCCT TCGGCAACCT CGACCGGCTC GAGAGCGGGA ACCTCATCAC CAGGCTGACG AACGACGTGA CCCAGATACA GGACGTGGTG ATGATGATGC TCAGGATGCT GTGGCGGGCC CCCATCATGC TCGTGGGGGG CATAGTGATG GCGGTGATCA CGAGCCCTCG CCTCTCGCTC ATGTTCCTCG TGATCATGCC CGTGCTGCTG GCGGTGATGG CGGTGCTGCT GCGGATGGGC TACAACCTGT TCAGCAGGGT GCAGGCCATG CTCGACAGGA TCAACACGGT GCTGCAGGAG AACCTGGCGG GCATAAGGCT GATCAGGGCG TTTGCCAGGC GAGACTTCGA GATCAACCGC TTCCGCGAGG TCAACGAGGG CTTCGCACAG GCCAACATCT CCGCCATCCG GCTGATATCT TTCGGCATGC CGTTCATGAT GCTGATGCTC AACGGCGGGA TAGTGGCCGT GGTCTGGTTC GGCGGGCGGT GGGCCATCGG GGGCTCCCTC CAAGTCGGCC AGCTGGTGGC GTTCGTCTCC TACCTGGTGC AGAGCCTGAT GTCCCTCATG ATGGTGAGCA TGCTGATCGT GAGGCTCTCC CGAGCCGAGG CCTCGGCCGA CCGCATCTCA GAGGTGCTGG ACGAGCGGCC CGACCTGGCG GTGGCGACCT CGCCCGTGCG CGACGTGGAG GTCCAGGGGA GGGTGGAGTT CCAGCACGTC ACCTTCAGCT ACGACCACAG CGGGGGAGAT CCCGTGCTCC GCGACATCTC CTTCGTCGCC GAGCCCGGCC AGATGATAGG CATCATCGGG CCGACGGGGT CCGGCAAGTC CACGCTGGTG AGCCTCATAC CTCGCTTCTA CGATCCCACC TGTGGGCGGG TGCTCCTGGA CGGGGTCGAC GTGCGGGAGA TGGACGAGGA GCTGCTCCGC AGGTCGGTGG GGGTGGCCCT CCAGGAGGCG GTGCTGTTCA GCGGCACCAT CCGCGACAAC ATCCGCTTCG GTCGGCCGGA GGCCTCGGAC GAGGAGGTGG AGTGGGCCGC CAAGCTCGCG CAGGCGCACG ACTTCATCAT GAGCTTCCCG GATGGGTACG ACTCGGTCGT GGGGCAGCGC GGAGTCAACC TCTCGGGAGG GCAGAAGCAG AGGCTAGCTA TCGCACGCGC CCTGCTGGTG CGGCCCAAGG TGCTCGTGCT CGACGACAGC ACGAGCGCGG TGGACGCCGA GACCGAGTCC AGGATCCAGG CGGCCCTGCG GGAGCTGCGC CAGACCAGGT TCGTGGTGGC CCAGCGCATC AGCTCGGTGA TGCCCGCGGA CAAGATACTG GTGCTCGAGG ACGGCAGGAT AGTTGCCCAG GGCACCCACG ACGAGCTGAT GCAGACCAGC CCGGCCTATC GGGAGATCTA CGAATCACAG ATGGAGCACG GAGCGGTAGT ACATGACGCA GCCTAG
|
Protein sequence | MRSTRKLLRF IRPYWLWALL APLSMILEVL MDLLQPRLVQ QIIDEGILRS DMRTVTHTGL LMVVVAVVGL AGGMACTVFA FLASMGMGAD LRAELFRRVQ SFSFGNLDRL ESGNLITRLT NDVTQIQDVV MMMLRMLWRA PIMLVGGIVM AVITSPRLSL MFLVIMPVLL AVMAVLLRMG YNLFSRVQAM LDRINTVLQE NLAGIRLIRA FARRDFEINR FREVNEGFAQ ANISAIRLIS FGMPFMMLML NGGIVAVVWF GGRWAIGGSL QVGQLVAFVS YLVQSLMSLM MVSMLIVRLS RAEASADRIS EVLDERPDLA VATSPVRDVE VQGRVEFQHV TFSYDHSGGD PVLRDISFVA EPGQMIGIIG PTGSGKSTLV SLIPRFYDPT CGRVLLDGVD VREMDEELLR RSVGVALQEA VLFSGTIRDN IRFGRPEASD EEVEWAAKLA QAHDFIMSFP DGYDSVVGQR GVNLSGGQKQ RLAIARALLV RPKVLVLDDS TSAVDAETES RIQAALRELR QTRFVVAQRI SSVMPADKIL VLEDGRIVAQ GTHDELMQTS PAYREIYESQ MEHGAVVHDA A
|
| |