| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tter_2260 |
|---|
| Symbol | |
|---|
| ID | 8640289 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobaculum terrenum ATCC BAA-798 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013526 |
|---|
| Strand | + |
|---|
| Start bp | 406861 |
|---|
| End bp | 407853 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | |
|---|
| Product | Uroporphyrinogen decarboxylase (URO-D) |
|---|
| Protein accession | YP_003323981 |
|---|
| Protein GI | 269839289 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000000000313707 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCACAGA GCAAGTGGGA CAGGGTGTCT GCGGCGCTGG AGGGGGGCAG GCCCGACAAG
GTGCCGCTGA CCTTCTGGAT GCACTTCCCG GAGGTGGACC GCTCCGCCCG TGGGCTGGTG
CGCGCCACGT TGGACCTTTA CCGGCGCTAC GACCTGGACC TCATCAAGGT CATGTTCCGC
AGCTCCTTCG GCCTCGAGGA CTGGGGCGTA CACTTCGGGA GCTACCACCC CACTCGTGGC
TCTTGGCAGA CGGAGGAATA CGTAGTGCAC ACCCCGGAGG ACTGGGGGAC CATCGAGGTG
CTCCCACCCG ATCGGGGCGT GCTGGGGGAA CAACTGGAGG TGCTGTCACA GCTGCGTAAG
GAGGTGGGGC CTGATGTGCC TGTGCTGGCT ACGCTGTTCT CTCCCTCTAT GCTGGCGGTC
AGGCTATCCG GCAGGGCCAG GTTCCTGGAG CACTGGAGGA CGCATCGGGA CGACGTGGAG
CGTGCCCTCA AGGTGATAGG GGAGACCGTG ATGGCGTTCG GTCTGGCATG CCTGCGTGCG
GGCGCCGACG GCATATTCTA CGCCATCGAG CTGGGCAGCG GACGAGCCAT GCCGCATGAG
GAGTACAGTG CCATAGGCGA GAGGTACGAC CGGCCCATCC TGGCCGAGAT CCACGAGAGG
TCTCGCCTGA CGATGCTCCA CCTGCATGGC GAGGACCTGG CCTTCTCCGA GCTTGTCAAC
TATCCATCGC ATGTGGTTAA CTGGTACGAT AGATGTGCTG GGCCGAGCCT GCGCGATGCG
AGGGCGGTCA CCAGCAAGTG TTTGGCTGCT GGCATAGATC ACGAGAGAAC CCTTATGCTG
GACACTCCAG AGGAGATAGC CTCGGAGGTG CGTGCGGCTG TGGCCGAGGT GGATGGCCGC
GGCCTGATCC TGGCGCCTGG GTGTGGCATA CCCATCACGG TGCCGGAAAG GAGCCTGCGC
GCGCTCGTGG AGGCCAGGAA CTCTCTGGCA TAG
|
|---|
| Protein sequence | MAQSKWDRVS AALEGGRPDK VPLTFWMHFP EVDRSARGLV RATLDLYRRY DLDLIKVMFR
SSFGLEDWGV HFGSYHPTRG SWQTEEYVVH TPEDWGTIEV LPPDRGVLGE QLEVLSQLRK
EVGPDVPVLA TLFSPSMLAV RLSGRARFLE HWRTHRDDVE RALKVIGETV MAFGLACLRA
GADGIFYAIE LGSGRAMPHE EYSAIGERYD RPILAEIHER SRLTMLHLHG EDLAFSELVN
YPSHVVNWYD RCAGPSLRDA RAVTSKCLAA GIDHERTLML DTPEEIASEV RAAVAEVDGR
GLILAPGCGI PITVPERSLR ALVEARNSLA
|
|---|
| |