Gene Tter_2101 details

Gene Information

• Locus tag: Tter_2101
• ID: 8640130
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermobaculum terrenum ATCC BAA-798
• Kingdom: Bacteria
• Replicon accession: NC_013526
• Strand: +
• Start bp: 231296
• End bp: 233212
• Gene Length: 1917 bp
• Protein Length: 638 aa
• Translation table: 11
• GC content: 67%
• Product: N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
• Protein accession: YP_003323825
• Protein GI: 269839133

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.000000000444895
• Plasmid hitchhiking: No
• Plasmid clonability: unclonable

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTGCGTC GATGTAATCT TTTCCTGATC CTGCTGCTGG TGGTGTGCCT GCTGGGGGCG 
TTGCTGCCGC CGCGTCCGGT GGCTGCTAGG TCCGATCCCT ACAGGCTGCA GAGGGCGTTC 
TCCAAGGCCG CCAGGGAGTT TCACGTGCCG CTCCCGGTGT TGCTTGCGGT GGCCTACAAC 
AAGTCGCTCT GGGAGCACCA CGACGGGCGG CCCAGCGCAG ATGGGGCCTA CGGCGTAATG 
GCGCTCTCGG ACGTCGATCG GGTACCGGTC GTCGACGGCC GAGGACAGGA TGGTCGCGTG 
GAACGCCGAT GGGTCTCGGT CGAGTCCGTG CCTCGCTACC ACACGCTGGA GGCAGCTGCC 
AGGCTGCTGG GGGTATCCCC CGAGGTGCTC AAGCGCGACC CCGCGCAGAA CATCCGGGGA 
GGGGCGGCGC TCCTGGCGAG CTATGAGCAA CAGCTCATTG GGGCCACGCC GAGCGATCCA 
GCCAAGTGGT ACGGGGCCGT CGCCAAGTTC AGCGGCTCGG ACGTGCTGCA GGCTGCCAAG 
GCCTTCGCCG ACGACGTGTA CGCCACGATC AACAGCGGCG CAGCCCGAGT GCTTGCGGAT 
GGGCAGGTGG TGCGCCTCCG AGCCCAGCAC GTGGTGCCCG CTAGGAGCAC CGCCAAGCGG 
CTGCACCTGC GCAGCCTCAG GGAGGGCGAG GCTGAGTGCC CGCCCGGTCT GGCCTGTAAC 
TACGTGCCCG CGCTCTACAC CCAGTTCTCG AGCGACCCCG GGGACTACGG TAACTACGAC 
CTGGCGAACA GGCCCGCTGA TGGCCTCGAG ATCCAGTACA TAGTCATCCA CGACACTGAG 
GGCTCCTACG CCAGCGCGCT GTCGACCTTC ACCTCGCAGA GCTACGTGAG CGCCCACTAC 
CTCATCAGGT CGTCCGATGG TTTGGTGACG CAGCTTGTGC CCACCAAGGA CGTCGCCTGG 
CAGGCGGGAA ACTGGTACGT CAACATCCAC TCCATCGGCA TCGAGCACGA GGGCTTTGCG 
GTGGAGGGCG CCACCTGGTA CACCGAGCAG ATGTACAGGT CCTCTGCCAG GCTGGTGAGG 
TATCTGGCCG CGAGGTTCCA TATCCCTCTG GACCGGGCAC ACATCTTGGG GCACGACGAC 
GTGCCCGGTC CGGGGCCGGC CTACCAGGGG CGTATGCACT GGGATCCGGG CCCGTATTGG 
GACTGGGCGC ACTATATGGC CCTGCTCGGG ATTGCTCCCA GGTCTCAGCG GGCGCACGGG 
GTGACCGCTG GGAGGATCGT CATGATCGCG CCCAATTTCC ACACGAACAA GCCCACCGTG 
ACGTACACCG ACTCGGAGGG CAATATGTAC ACGCTACCCA GCCAGCCGGC GAACTTCGTG 
TACCTGCACA CCGCGCCGAG CTTCGATGCC CCGCTGATCA GCGATCCCGC GCTGCACCCT 
GACGGCTCGG CGGGCACGAC GCTCGCCTAT GACTGGGGCG ACAAGGCGGT GACCGGTCAG 
CGGTTCTACC TGGCCGAGCA GAGGGGCGAC TGGAGCGCGA TCTTCTACGG CGGTAAGAAG 
GCCTGGTTCT ACAACCCGGG CGGCAGGACC AACACCGTGC GGAGCAGTGG GCTGCTGGTG 
ACGCCCAAGC CGGGCGCGGC GTCCGTGCAG GTGTACGGGG CGGCCTACCC CTCGCCCGAG 
GACTACGCCT CCGCGGGCGT GCCCACCATC CACACGCTCC AGCCCCTGCA GTACGCCATA 
CCCGCCGGGC AGTACTACGT GGCGTGGGGA CCCGTCAGGG CCCAGGACTA CTACGCCGTG 
ACCTTCAACG CTCCGGAGGA CTACAGGGTG GTGGACGGGC ACGAGCTGTT CTACGTGATA 
GCCTTCAACC ACAGGATCGC CTTCGTGCGC GCCAGCGACG TAGCGGTGAT CCCCTAG 

 

Protein sequence

MLRRCNLFLI LLLVVCLLGA LLPPRPVAAR SDPYRLQRAF SKAAREFHVP LPVLLAVAYN 
KSLWEHHDGR PSADGAYGVM ALSDVDRVPV VDGRGQDGRV ERRWVSVESV PRYHTLEAAA 
RLLGVSPEVL KRDPAQNIRG GAALLASYEQ QLIGATPSDP AKWYGAVAKF SGSDVLQAAK 
AFADDVYATI NSGAARVLAD GQVVRLRAQH VVPARSTAKR LHLRSLREGE AECPPGLACN 
YVPALYTQFS SDPGDYGNYD LANRPADGLE IQYIVIHDTE GSYASALSTF TSQSYVSAHY 
LIRSSDGLVT QLVPTKDVAW QAGNWYVNIH SIGIEHEGFA VEGATWYTEQ MYRSSARLVR 
YLAARFHIPL DRAHILGHDD VPGPGPAYQG RMHWDPGPYW DWAHYMALLG IAPRSQRAHG 
VTAGRIVMIA PNFHTNKPTV TYTDSEGNMY TLPSQPANFV YLHTAPSFDA PLISDPALHP 
DGSAGTTLAY DWGDKAVTGQ RFYLAEQRGD WSAIFYGGKK AWFYNPGGRT NTVRSSGLLV 
TPKPGAASVQ VYGAAYPSPE DYASAGVPTI HTLQPLQYAI PAGQYYVAWG PVRAQDYYAV 
TFNAPEDYRV VDGHELFYVI AFNHRIAFVR ASDVAVIP