Gene Tter_1952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTter_1952 
Symbol 
ID8639981 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobaculum terrenum ATCC BAA-798 
KingdomBacteria 
Replicon accessionNC_013526 
Strand
Start bp73895 
End bp75055 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content51% 
IMG OID 
ProductCRISPR-associated RAMP protein, Cmr1 family 
Protein accessionYP_003323680 
Protein GI269838988 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGAGT TAGAGCTTAG GATGAAGGTC GTGACGCCGC TGTTCATGGG GGGAGCAGAC 
AACACGCAGG CCGAGCTACG TCCGTCCTCT ATCAAGGGAC TGCTGCGCTT CTGGTGGAGG
GCAATACAGC CGCCGGAAGT TATCAAAAGT GTGGCAGTAA AGGAACAAGA CAATCAAGCT
AAGGGAGATA AAGATATTCC CGAAATAGTT AAGAAGGAGT CGAAGATCTT TGGTGGAGCT
GGCAAAGATC AAGGCCAGTC GAGGGTACAC ATAAGAATAG TCAAGCTTCA GGATCCCAGC
ATCGAGGCCT ACCGAGGTAA AAGAGACCAG GTAGGCATAA CTTATCTTGG GTACGGCGTT
GCCGACTCCA AGTCAAACCG CAAAGCGATA ATGCCGGGGT ATGAGTTTGA GGTCCAGATA
AGCCTTAGAG ACCTGACTCC TTCAGAAGAG GAGGAGGTCA TGGATGCCCT ATGGTGCATG
ACTCACCTGG GGGGGATGGG ATCCAGGTCG CGGCGCGGCT TCGGATCGGT GGTGGCTACC
AGGGATATCT ACAAGTCAAA AGATGAACTC GTGCAGGCCA TAAAAGTTAA GCTGGATAGG
ATCCGACAAC GCTCACAGGA TCAGGGCGGG CTACCAGACT ACACGGCCAT AACCAAGAAC
ACAAGAGTCT ACATCCTTGA GCCTGAAAAC AGTTGGGAAA AAGCCCTCAA CAAGGTAGGT
GTTCTCCTGT CTCAATACAG ATTAGGGACG CGCGGCCAAC CTGCACAGAT AGTGAGACCA
CAAGATTTCA TTACAGAGAC GCAAGAGGTA AAGGCTTTTG CTAGTAGAGG GGAGTGCCCA
CAGAACCCAC CGCCAAGGGC GCTGTTCGGG CTGCCGCATA ATTACTTTTT CAAAGATACT
AGGCAAAATG TACAGACCGA GGCCGAGCTG CAAGGGACGA AGATAACCCG CAGGGCGAGC
CCCCTCTTCA TCCACATCCA TCAGCTAGCA AGCGACCAGT ATGTGCCCGT TATCTCTTTT
ATACCCGCGA AGTTCCTGCC TAAGGATAGT CAACTAGTAC TAGAAAGCAA TGGTAGGAAC
TGTAATACAC CGCTACCTCC AAGCTATAAG CCTATATTGG ACTTCTTGAG GAAGATGCCC
AACTCCGAGG TGGTGCTATG A
 
Protein sequence
MKELELRMKV VTPLFMGGAD NTQAELRPSS IKGLLRFWWR AIQPPEVIKS VAVKEQDNQA 
KGDKDIPEIV KKESKIFGGA GKDQGQSRVH IRIVKLQDPS IEAYRGKRDQ VGITYLGYGV
ADSKSNRKAI MPGYEFEVQI SLRDLTPSEE EEVMDALWCM THLGGMGSRS RRGFGSVVAT
RDIYKSKDEL VQAIKVKLDR IRQRSQDQGG LPDYTAITKN TRVYILEPEN SWEKALNKVG
VLLSQYRLGT RGQPAQIVRP QDFITETQEV KAFASRGECP QNPPPRALFG LPHNYFFKDT
RQNVQTEAEL QGTKITRRAS PLFIHIHQLA SDQYVPVISF IPAKFLPKDS QLVLESNGRN
CNTPLPPSYK PILDFLRKMP NSEVVL