Gene Tter_1947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTter_1947 
Symbol 
ID8639976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobaculum terrenum ATCC BAA-798 
KingdomBacteria 
Replicon accessionNC_013526 
Strand
Start bp68050 
End bp69471 
Gene Length1422 bp 
Protein Length473 aa 
Translation table11 
GC content61% 
IMG OID 
ProductCRISPR-associated RAMP protein, Cmr6 family 
Protein accessionYP_003323675 
Protein GI269838983 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAAGA GCAGAGATCG CCGCCAGCAG AACAGACCAC AAGGTACCCC CAAGGGTAGC 
ACCGGGAGCG CATCCAAGCC TCAGGAACAG CATCAACGAA ATATCATCTA TGGAAACCAT
CTGCCCCTGT ATAAATCCGT CCAGGATGTG TTCATCAAAG TGGCACCATT CAAGAATCGC
GTCGGCAACC CCTCGCTGCT GTACGACAAG TTCATCGACG TCTGGCACTG GAGCAGCAAT
GACCCCCTGA ACGGCATTGT CAAAGAGGTC AAAACAGGGC GAAATGGTAG CAATCAAGAG
TCCGTCATCA AGCTCTTCCT GCAGAAGTTC CTGCCCCTTC ATCAATGGGC AAGGGAGTTA
AAGAACGACC TGGAAGACTA CTTGCAGCGG CGCAGGGAGC TGGTGCGGAA GCTGGGGGGC
AGGACCATCC GGCTGCGGAC CGAGTGGCGC TTCATGTCCG GTACCGGCGC TCATCACCCA
CTGGAGAGCG GCTTCGTGTG GCACCACACG CTGGGAGTGC CCTACCTGCC GGCCTCCGGC
GTCAAGGGCG TGATAAGGGC ATCTATAACC CCCCTTCGCC CCGGGGAAGA CGCGAGCCCA
GAGGAGATCA GATCCTACTT CGAGAAGGTG ATGAAGGTCG AAGAGCTCTT TGGCTACGAG
AGCATAGAGA AGGAGGACGC CCTGCTCAAT AAGCTCAGCG ATGACGAGCG GCAGAGATAC
AACCGCAGCC CCAGGGAGGG CTCCCTCATC GTGTTCGATG CCATCCCCAC AGCGTTGCCC
AAGCTCGAGC TGGATATCCT CAACGTCCAC TACCCAGATT ACTACGGGCA GCACGAGCCG
CCCGCTGACT GGCAGTCGCC CAACCCCGTG TACTTCCTGA CGGTGGGGCC GGACTGCGAG
TTCGAGTTCG CGCTGGCCCC GATCGCCCGC AACAGCGATG GGCGCACCGA CAAAGAGAAG
GGGGAGCGCC TGCTTGAGGA GGGCGAGGAG ATCCTGATGG AAGCGCTGAA CAGCCTGGGG
GCGGGAGCCA AGACCTCTAT CGGCTATGGC AGGTTCAGGC GGTCCACCCA GGAAGGCGCT
CAGGAGACCG CATCCGCTGC GACCACGGCC GTCGCCTCTG CACCAGAGGG AACCCCCTCG
CCCACCACGA CCACAACCGC CGCGCCCTCG GGGCAGGACC TCAGGTTCGA AGAACTCCAG
CGCCAGATAG GTGCATTGAG GTCAGGCGAT ATAGGTAAAG CAGATGCCGC GGTGAACTCG
ATAGCCAACG CCGATCTCTC GCCCGCACAG CGCAGGGAGC TGGCGCGCCA GCTCGATGCC
AAGCTGTTCC CTCCGGGCAG CGACAAGAAG CGCCAAGAGC GCCAGGATAA GGGCTGGTAC
AAGAAGCTGC AGAACCTGAT CGAGAAGGGG GAGGCAGAGT AA
 
Protein sequence
MSKSRDRRQQ NRPQGTPKGS TGSASKPQEQ HQRNIIYGNH LPLYKSVQDV FIKVAPFKNR 
VGNPSLLYDK FIDVWHWSSN DPLNGIVKEV KTGRNGSNQE SVIKLFLQKF LPLHQWAREL
KNDLEDYLQR RRELVRKLGG RTIRLRTEWR FMSGTGAHHP LESGFVWHHT LGVPYLPASG
VKGVIRASIT PLRPGEDASP EEIRSYFEKV MKVEELFGYE SIEKEDALLN KLSDDERQRY
NRSPREGSLI VFDAIPTALP KLELDILNVH YPDYYGQHEP PADWQSPNPV YFLTVGPDCE
FEFALAPIAR NSDGRTDKEK GERLLEEGEE ILMEALNSLG AGAKTSIGYG RFRRSTQEGA
QETASAATTA VASAPEGTPS PTTTTTAAPS GQDLRFEELQ RQIGALRSGD IGKADAAVNS
IANADLSPAQ RRELARQLDA KLFPPGSDKK RQERQDKGWY KKLQNLIEKG EAE