Gene Tter_1895 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTter_1895 
Symbol 
ID8639924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobaculum terrenum ATCC BAA-798 
KingdomBacteria 
Replicon accessionNC_013526 
Strand
Start bp14443 
End bp17277 
Gene Length2835 bp 
Protein Length944 aa 
Translation table11 
GC content65% 
IMG OID 
ProductCRISPR-associated helicase Cas3 
Protein accessionYP_003323623 
Protein GI269838931 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000246489 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGGCG GACCGGGTAT GGATGGCACT AGCGAGGTTG ATCTATCAGG GGCTGGGAGC 
CCGGTAGGGG CGGCTGGCTG GAGGGTTGAT CCCTGGATTT TCTGGGCCAA GTGGGGTAGT
GGGCCTGATC TGGGGTGGCA TCCGCTGTTG TGTCATATGC TGGATGTGGC GGCGGTGACC
TTGCAGATGT GGCGCAGGGT GCTGCCGGCG GCCTGGAAGG CCAGGATCAG CGGCGTTCTT
GGGGTAGGGC AGGAAGATGC CGAGAGATGG CTGGCGTTCT TTGCGGGCGG CCATGACATA
GGCAAGGCTT CGCCTGCGTT CCAGCTGCAG CTGCGGCCTG AGCAGGGCAG GGAGCTGGTG
GCTCGTCGCC TGCGGGATGC TGGCCTGCCT CTGTTCAATG CGCGTGCGCC TCATGGCACG
ATCTCGGCCA ATGTCCTGGA GACGGTGCTT GCAGATGTCT TCGGCTTGAG TGGCCGGTCT
GCGCGGTGGG TGGCGTTTGC TGTGGGAGGT CACCATGGCT TCGTCCCCAG CTATGACGAG
GTCAGGCGGG ATCTTGACCA GCAGGCCGTG GGCTGGGGGA TGTGGGATGC GGCCCGGGAG
GTGCTGCTGT GCAGGCTGGC TGATGCGCTC GGGCTGCCGG GATCCTCTCG CCCGACTGTC
GAGTCCACGC CGGATGCCTT CATGCTGGCC GGGCTTGTCT CCGTGGCGGA CTGGATAGGC
TCGAATGAGG AGTACTTCCC CTATGCTGCC CAGAGCGCTC TGCAGGTGCC GCAGCTGGAT
GCTGAAGCCT ACCTCGAGAG GGCGATGCGG CAGGCCGAGA GGGCGATGGC CAGCCTGGGA
TGGGTGGGCT GGAGGCCTGC TTCCGGGTCC ATGCGGCTTA CCGAGCTGTT CCCTTATATC
AGGCAGCCGA CCACGGTGCA GGCTGCCGCT GAGGAGCTGG CCGGGGAGGT AAAGTCCCCA
TCGATCACCA TCATCGAGGC GCCCATGGGA GAGGGGAAGA CGGAGGCGGC CATGCTGCTT
GCGGATACGT TCAGCACCGC GCATGGCATG AGCGGCTGCT ACTTTGCGCT GCCCACGATG
GCCACCAGCA ACCAGATGTT CGGCAGGGTG ACGGATTACC TCAGGCACCG CTATCCGGAA
GACGTGGTGG TGGTCAACCT GGTGCATGGG CATTCGGATC TCTCGGCACT GCTGCAGGAG
CTGAGGCAGA AGGGGGAGGA GATCTTCCAG CTGCAGGGGG TATATGATGA GGCTCTGGGC
GATGAGCAGC TGGGCGCGGT GGTGGCAGGG CAATGGTTCA CGCGCGGCAA GCGGGCTTTG
CTGCCTCCAT ATGGGGTGGG CACGGTCGAT CAGGCGCTGC TGGCGGTGCT GCAGGTGAAG
CACGTCTTCG TGAGGCTGTT CGCGCTCTCG ACGAAGACCG TGATCGTTGA TGAGGTCCAT
GCTTACGACG TGTATATGAC CACCCTGCTG CACAGGCTAC TGGAGTGGCT TGGGGCTCTG
TCGGTCCCCG TGGTGGTGCT CTCGGCTACA TTGCCCAGCG CGCGGCGTCG AGAGCTGGTG
AAGGCCTATG CCAGGGGTGC AGGTTGGCAG GCTGAGAGGG ATTTGCCACC GGCGGGGTAC
CCGCGCATAA CCTATGCGGC CGCCGAGGAT GTGAGGGGTA TCCACTTTGC GCCCTCTGAG
GCTTCTCGCA GGAAGGTGGC GCTGCGCTGG GTAAGCGCTC CTGAGCACGA GGCGCTGGGG
CAGCTGCTGG CTGAGGCGCT CTCACAGGGG GGCTGCGCAG CGATCATCTG TAACACTGTC
CCTCGAGCGC AGGCCCTGTA CTCCGCACTC AGGGAGGTCT TCCCCGGCCT GGCCGAAGAT
GGCATGCCGG AGCTGGACCT GCTGCACGCC CGCTATCCCT ACGAGGAAAG GGAGGTGCGC
GAGGCACGCA CGCTCGGGAG GTTCTCACGC AATGGCCGCA GACCTCACCG CGCGATACTG
GTGGCCACGC AGGTGATAGA GCAAAGCCTG GACCTGGACT TCGACCTCAT GGTCACCGAC
CTGGCCCCGG TAGATCTCGT GCTCCAGCGC ATGGGTAGGC TGCACCGCCA CCCCGTTCAT
GACCCGCTCA GACCCGAGAG GTTGAGGTCG CCTGAGCTGT GGGTGGTATC GCCCCAGGTC
ATGGGGGATG TGCCGATATT CGACAGAGGC AGCGCCAGCG TCTATGACGA GCACACGCTG
CTGCGCAGCT GGCTCGCCCT GCGCGATCGG GACACCCTGC AGCTGCCGGA GGATATCGAG
GAGCTGGTGG AGCAGGTCTA CAGTGATGGG CGGGTGCCGC AGGGTGCCTC CGAGGAGCTG
CGAAGCCTCT GGGAGCGGAC CTTCAAGGCC CAGCAGAAGG TGCTCAGGGA AGATAGCCTG
CAGGCCAAAT ACAGGTACAT CAAGGGGCCT GGATACAACT CGATATGGGG GATAGTAACA
GCGAGCGTGG AGGAGGATGC CCCCGAGCTG CACCCTGCGC TGCAGGCTCT CACTCGTCTG
GCGGAGCCCA GCGTGTCCGC CGTGTGCCTC GTGGCTGGGA GCGGTGGGCC CTGCCTGCCG
GATGGTACGC CGGTGGATCT CGATACGCCG CCGGACGCTG CGATGGCCGA GAGGCTGCTG
CGCCGCTCGG TGGCCATTAC AGATGCCAGA GTGCTGGATC CCCTGCTGGA TGTGCCCGTG
CCGAAAGGCT GGGAGCGCTC CTCGCTGCTC AGGGGGTACA GGCCCCTGGT CTTTGATGCC
TCAGGAAGGG CCATGGTTGG CAGGTGGATC GTAAGGATTG ATCCCGAGCT CGGGATTGTA
GTGGAGAGCC CTTAG
 
Protein sequence
MNGGPGMDGT SEVDLSGAGS PVGAAGWRVD PWIFWAKWGS GPDLGWHPLL CHMLDVAAVT 
LQMWRRVLPA AWKARISGVL GVGQEDAERW LAFFAGGHDI GKASPAFQLQ LRPEQGRELV
ARRLRDAGLP LFNARAPHGT ISANVLETVL ADVFGLSGRS ARWVAFAVGG HHGFVPSYDE
VRRDLDQQAV GWGMWDAARE VLLCRLADAL GLPGSSRPTV ESTPDAFMLA GLVSVADWIG
SNEEYFPYAA QSALQVPQLD AEAYLERAMR QAERAMASLG WVGWRPASGS MRLTELFPYI
RQPTTVQAAA EELAGEVKSP SITIIEAPMG EGKTEAAMLL ADTFSTAHGM SGCYFALPTM
ATSNQMFGRV TDYLRHRYPE DVVVVNLVHG HSDLSALLQE LRQKGEEIFQ LQGVYDEALG
DEQLGAVVAG QWFTRGKRAL LPPYGVGTVD QALLAVLQVK HVFVRLFALS TKTVIVDEVH
AYDVYMTTLL HRLLEWLGAL SVPVVVLSAT LPSARRRELV KAYARGAGWQ AERDLPPAGY
PRITYAAAED VRGIHFAPSE ASRRKVALRW VSAPEHEALG QLLAEALSQG GCAAIICNTV
PRAQALYSAL REVFPGLAED GMPELDLLHA RYPYEEREVR EARTLGRFSR NGRRPHRAIL
VATQVIEQSL DLDFDLMVTD LAPVDLVLQR MGRLHRHPVH DPLRPERLRS PELWVVSPQV
MGDVPIFDRG SASVYDEHTL LRSWLALRDR DTLQLPEDIE ELVEQVYSDG RVPQGASEEL
RSLWERTFKA QQKVLREDSL QAKYRYIKGP GYNSIWGIVT ASVEEDAPEL HPALQALTRL
AEPSVSAVCL VAGSGGPCLP DGTPVDLDTP PDAAMAERLL RRSVAITDAR VLDPLLDVPV
PKGWERSSLL RGYRPLVFDA SGRAMVGRWI VRIDPELGIV VESP