Gene Tter_1339 details

Gene Information

• Locus tag: Tter_1339
• ID: 8645835
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermobaculum terrenum ATCC BAA-798
• Kingdom: Bacteria
• Replicon accession: NC_013525
• Strand: +
• Start bp: 1447092
• End bp: 1449020
• Gene Length: 1929 bp
• Protein Length: 642 aa
• Translation table: 11
• GC content: 51%
• Product: transcription termination factor Rho
• Protein accession: YP_003323068
• Protein GI: 269926445

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATAACA CTAAAAATCA AGAACTAGAA AGGAACAGCG AAGAGATCGC AACCACAACG 
ATTACAGAAA TTCCAGCAGA TACGAGAGCA TCAGACCCTC AGCAAAGCCA ACAAGCGCAC 
GATACAGATA AGCAGCCATC AGATCAGATA GCAAGCGACA ACGTAGAGCC CGGTAATGTA 
ACTTCAGAGA AATCATCAGA AGATCAACTT GAACTTCCTA TATCTGAACA GAGAGTTGAG 
AATACCCCTG AAGTCGCGAC AGAAGTGCCT ACCAGCCAGC AAAGCAGCAT GCATACTCAA 
GGAGATAATT CTTCCAATAG TAAACAAGCA GATACCTCAG TTGTTACCGA ACAATCGGCC 
GAGCCTGATC CCCCAGTTGC TGAGGTAACA AAAGTAGCTG AAGTCGGGCA ACAGGAGGAG 
CAAGCCGAAC ACAGGGAAGA TGCAGCTCAG GAGCCTTCCT CGACAACAAC TGTGGCAGAG 
GAAGCTACCT CCGAAGCAGC AACTCCTCCA GAGGTGGATA AGGCGGAAGA AAAGCCGAGT 
AGCAAGAGGT CGAAGAAGAA GCCAAAGCAG AATAACGGTC GGAACGGGAA CAACCAGCAG 
GAAAGGACGA ATGGTAACAA CACGGCAGTT GCCGTGGCCA AGAAGCCTTC TAACGAGACA 
GAAACCGTTC AGGCTCCCAC CTTCACCTTT GCAGAGCTAC AGAGTATGAC CAAGACTAAC 
CTGCTTGCCC TGGGCAGAAG CCTGGAAGTC GAAGTCTCAG GCAGCATGAC CAAGGAGACC 
CTGATCTATA AGATACTGGA AGCCCAAGCC AACCGCGCTG GTTATCTGCT GAAGCAGGGC 
ATTCTGGATA TCATAGAAGA CGGCTTCGGA TTTCTCAGGC AGGAGAGGTA TCTGCCTTCT 
CCAGATGATG TGTACGTCTC ACAATCTCAG ATTCGTAGAT TTGGGCTCCG TACTGGCGAC 
CACGTAATAG GTCAGGTTAG GGCTCCAAAG GACAACGAAA AGTATCACTC CCTGCTCAGG 
GTGGAAGCCG TAAACTATAT GGACCCAGAG GCCGCACGAA AGCGCCCATT TTTCGACCAG 
CTAACGCCCA TCTTCCCTAA CCGGCAGCTG GTCCTTGAGA CTACCCCGAA GCAACTTAGC 
ACTAGGCTTA TAGATCTGGT AGCACCAATA GGTAGGGGCC AGCGTGGCCT TATAGTATCA 
CCGCCCAAGG CAGGTAAGAC CACGCTACTC AAGGACATCG CCAACGGCAT AACTCACAAC 
TACGATGATG TTCACCTCAT GATGCTCCTG ATAGGTGAGC GCCCTGAGGA GGTTACAGAT 
ATCCGTAGAT CGGTAGAGGG AGAGGTCGTA GCAAGCACCT TTGATGAGCC CGTTGAGGAC 
CACACCAAGG TCGCTGAGAT GGCTCTTGAG CGAGCCAAGC GTCTGGTTGA GTGTGGGAAA 
GACGTAGTGA TACTCATGGA CAGTATCACC AGGCTGGCAA GGGCCTATAA CCTGGTAGTA 
CCCGCAAGCG GCAGAACGCT CTCAGGTGGC ATAGATCCCG TAGCCCTGTA TCCTCCCAAG 
AGATTCTTCG GAGCGGCCAG AAACATAGAC GAAGGCGGGA GCCTCACAAT AATAGCCACA 
TGCTTAATAG ATACCGGTAG CCGTATGGAC GATGTGATCT ATGAAGAGTT CAAAGGTACT 
GGTAACATGG AGCTCCACTT GGATCGCAAG CTCCAAGAGA GAAGGATATT CCCAGCTATA 
GATGTGCAAC GGAGCGGTAC CAGAAGAGAA GAACTGCTCA TACCTGAGCC AAAGCTGCAG 
AAGATCTGGA CTATGCGCAG GATGGTAAGT ATGCTAGGGG GACTTGAAGG TACCGAACTC 
CTCCTGAACC GCCTGGCAAA GACCGAAAAC AACGAGGAAT TCCTGAATAC CCTCAATAAG 
GAGCTTTAG 

 

Protein sequence

MDNTKNQELE RNSEEIATTT ITEIPADTRA SDPQQSQQAH DTDKQPSDQI ASDNVEPGNV 
TSEKSSEDQL ELPISEQRVE NTPEVATEVP TSQQSSMHTQ GDNSSNSKQA DTSVVTEQSA 
EPDPPVAEVT KVAEVGQQEE QAEHREDAAQ EPSSTTTVAE EATSEAATPP EVDKAEEKPS 
SKRSKKKPKQ NNGRNGNNQQ ERTNGNNTAV AVAKKPSNET ETVQAPTFTF AELQSMTKTN 
LLALGRSLEV EVSGSMTKET LIYKILEAQA NRAGYLLKQG ILDIIEDGFG FLRQERYLPS 
PDDVYVSQSQ IRRFGLRTGD HVIGQVRAPK DNEKYHSLLR VEAVNYMDPE AARKRPFFDQ 
LTPIFPNRQL VLETTPKQLS TRLIDLVAPI GRGQRGLIVS PPKAGKTTLL KDIANGITHN 
YDDVHLMMLL IGERPEEVTD IRRSVEGEVV ASTFDEPVED HTKVAEMALE RAKRLVECGK 
DVVILMDSIT RLARAYNLVV PASGRTLSGG IDPVALYPPK RFFGAARNID EGGSLTIIAT 
CLIDTGSRMD DVIYEEFKGT GNMELHLDRK LQERRIFPAI DVQRSGTRRE ELLIPEPKLQ 
KIWTMRRMVS MLGGLEGTEL LLNRLAKTEN NEEFLNTLNK EL