Gene Tter_0143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTter_0143 
Symbol 
ID8644601 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobaculum terrenum ATCC BAA-798 
KingdomBacteria 
Replicon accessionNC_013525 
Strand
Start bp153037 
End bp154203 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content46% 
IMG OID 
Producttranscriptional regulator, CdaR 
Protein accessionYP_003321887 
Protein GI269925264 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGGATGG AACAAGACTA CTTTCGAGAG GTGGCAAATA CCGTAGTCAA AAAGATTGGT 
AGTCTGCTAG ATCAACAAGT TATAGTGGCA GATGATCGGG GCTGGGTAAT AGCTAGTACG
GACAGAAGAT TTATGGGGAA GAATCTCGAT ACTAGTCCCA GCCGCCGTAT GCTTCACCAA
CTTAGAGTGC CGATAAAAAT AAGAGATAAG TGCGGGCAGT TGATGATTAT CGAGTCCAAC
AAGCCTTCTG TGCCTCCAAG GATGGCGGAG GCTCTCGTGG AGATGGTGAT CAATCAGATA
ATGCTGGTTG AAAGCCTTCC AAACCAATCC GATCTGAAGA ACAAGCTGAT ATATGATCTT
CTGCATGGTA ATTCTAGCGA TGAGACCTCA ATAATCAGGC AGGCTCAAAT CTTGGGAATG
GACTTAAACT TGCCACGAGC TGTGCTGCTG ATAGATGCTT CCAAATACAT CCTGGGGGGA
GATGATAGAC AATTACAGCA AAAGGTGAAC ACTATAATAA GGAGCATTGT AGACTTCTTT
ATGTTGCCCT CGGATACGAT ATGCGGCTAT ATAGGCGAGG GGGAAGTCGT AGTGCTCAAA
GCCAGTAGCT CAAGGGACCT TGCCAACTGG TTGCGACCGA AAGAGAAACT AGATACTAGT
CCTTCTTCAT GGGCAAATTT GGCGGCCTTA AAGAGGGCGG CTAACGCATT ATTGTCTAAG
TTACGATCTG AGACAAAGCA ACCCATTACT ATAGGGATCG GAAGATACCA TCCTGGTATA
CTGGGGCTCA CTGCTTCCTA TCAGGATGCT CGCGCAGCGC TCTCGCTTGG GCTTAAGTTC
TATGGTCCTA ACAAGGTCCA CTGTCTGGAC AGCCTTGGCA TACCAGCATT TGTCGGCATA
TCAGATGAAC GCACAAAGAA TGATTTGGCT ACACATCTAC TTAAGCCTCT TGAGAAATAC
CCAGAGCTGA TGCAAACTCT CGAGGTATTC TTTGATGAGA ATTGTTGTCC CACAAGTGCA
TCTAAAAAAC TCTGCATACA CAGAAATACC TTAACTTATC GCCTCGATAA GATAGCCTCC
TTGACAGGGC TTGACCCTCG TGACTTTGAT AGCGCTGTCC AGCTGAGGCT TGCACTCACC
CTCAAGGCTT CCAGCAGAAA CGAATAG
 
Protein sequence
MGMEQDYFRE VANTVVKKIG SLLDQQVIVA DDRGWVIAST DRRFMGKNLD TSPSRRMLHQ 
LRVPIKIRDK CGQLMIIESN KPSVPPRMAE ALVEMVINQI MLVESLPNQS DLKNKLIYDL
LHGNSSDETS IIRQAQILGM DLNLPRAVLL IDASKYILGG DDRQLQQKVN TIIRSIVDFF
MLPSDTICGY IGEGEVVVLK ASSSRDLANW LRPKEKLDTS PSSWANLAAL KRAANALLSK
LRSETKQPIT IGIGRYHPGI LGLTASYQDA RAALSLGLKF YGPNKVHCLD SLGIPAFVGI
SDERTKNDLA THLLKPLEKY PELMQTLEVF FDENCCPTSA SKKLCIHRNT LTYRLDKIAS
LTGLDPRDFD SAVQLRLALT LKASSRNE