| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tter_0108 |
|---|
| Symbol | |
|---|
| ID | 8644564 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobaculum terrenum ATCC BAA-798 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013525 |
|---|
| Strand | + |
|---|
| Start bp | 118745 |
|---|
| End bp | 119614 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | |
|---|
| Product | shikimate 5-dehydrogenase |
|---|
| Protein accession | YP_003321852 |
|---|
| Protein GI | 269925229 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACAGG TCGGTGTGAT CGGATACCCA ATAAAACACA GCATATCTCC AGTCTTTCAG
CAGGCAGCGT TTGATGCTTT AGGGATAGAA GCTATCTACA AAGCTTACGA GGTTCCACCT
GAAGATCTAA GAAGCTTTTT CTTCAATCTA AGAAATGGTA ACTGGCTAGG CGTAAACGTC
ACTATCCCAC ATAAAAGTGC TGCAGCGAAG CTGGCAGATG AACGATCTCA AGAAGTATCC
TTTACGGGAG CCGCCAACAC CATAATTAGC ATGAATGGTA GGTTGAAGGC CCATAACACA
GATATATCAG GATTCATTTT GGCTCTTGAG GAAAATGGAT TCCAGATCAA GTCTAAAAGG
GCTGTGGTGT TAGGCAGCGG AGGAACCACT CGGGCAGTAG TCTATGCACT TGCTATTTGC
GAGGCTCAAA GCATAGCGGT TATAGGTAGA AGTCAGGATA AAGTTCATTC TCTTATATCC
GAGTTAAAAC CTTTCTTTGA GCATAAGCAA GTAACAGTAA CCGGTCATTC TTGGGAGAAA
GATTCGATAA GGCGGCAGAT CCAGAATTCT GATATTCTCA TAAATACAAC CCCCATAGGA
ATGAAAGGGA CTGATCAGGA GCATTTATCT CCTGTGAGTA AAGAAGACCT AAGCAGTGAT
CTTATTGTTT TTGACGTCGT GTACAACCCA ATAATGACGC CCCTGCTTAC CTACGCCAAG
GATGTAGGAG CCTCTACTAT TAGCGGCATA GAGATGCTCA TTTACCAGGG GGCAGAATCT
TTTAGGCTAT GGACAGGACA AGAGCCTCCT GTGGATATCA TGCGCAAAGC TGCCATAAAA
GCAATGGAGG AAAAATCTAG AGATGTTTAG
|
|---|
| Protein sequence | MKQVGVIGYP IKHSISPVFQ QAAFDALGIE AIYKAYEVPP EDLRSFFFNL RNGNWLGVNV
TIPHKSAAAK LADERSQEVS FTGAANTIIS MNGRLKAHNT DISGFILALE ENGFQIKSKR
AVVLGSGGTT RAVVYALAIC EAQSIAVIGR SQDKVHSLIS ELKPFFEHKQ VTVTGHSWEK
DSIRRQIQNS DILINTTPIG MKGTDQEHLS PVSKEDLSSD LIVFDVVYNP IMTPLLTYAK
DVGASTISGI EMLIYQGAES FRLWTGQEPP VDIMRKAAIK AMEEKSRDV
|
|---|
| |