Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Taci_1466 |
Symbol | |
ID | 8631323 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermanaerovibrio acidaminovorans DSM 6589 |
Kingdom | Bacteria |
Replicon accession | NC_013522 |
Strand | - |
Start bp | 1526404 |
End bp | 1528269 |
Gene Length | 1866 bp |
Protein Length | 621 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | TRAP transporter, 4TM/12TM fusion protein |
Protein accession | YP_003317978 |
Protein GI | 269793074 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGACGTC TTGACGGCTT GATCGGCAAG TTCATGTACC TGTACGTCCT AGGGTTGGGG CTGTTTCACG TTTACACCTC CGTCTTCGGT GCCTTCGAGG CCTACCTGCA GAGGAACCTG CACCTGGCCA TGGTTATGCC CTTGGCCTTC GTCTTCTATC CCATGGGCAG GAGGTCCCCC ATGGATCGGG TGCCCCTCTA CGACTGGATA CTGGCGGGGC TATCAACCCT GCCGGGGCTC TACGTGGCGT TCAACTACGA GGAGATAACC TCAAGGATAA TCCAGGTGGA CCCGGTGACC CAGGTCCAGC TGGTCCTTGG GATCCTTCTC TTTGTGCTTC TCATGGAGGC CACCCGGCGG GTGGTGGGGC TGCCCCTCAT GGTGATATCC TGCGTCTTCG CCGCCTACAT GCTGCTGGGG GACAAGATGC CAGGCATCAT GAGGGGGCTG TCGTTCCCGC TGAGCGAGGT GGTGGAGCAA CTGTACCTCA CCGACGAGGG GATCTTCTCC ATGCCCCTTG GGGTTTCCGC CACGGTGGTG GCCGCCTTTC TGATATTCGG CGGCTTCCTG GAGAAGTGCG GCACCGGCCC CTACTTCATG GAGGTGGCCC AGGCTTTCAC CGGAACTGCC CCCGGTGGCC CCGCCAACAT AGCGGTCATG AGCTCCTGCC TCTTCGGCTC CATATCCGGA TCTGCGGTGG CCAACGTCTA CGGCACCGGC ACCTTCACCA TCCCGATGAT GAAGCGTATA GGGTACGAGC CCCACTTCGC CGGGGCGGTG GAGGCGGTGG CCTCCACCGG GGGACAGATA ATGCCGCCGG TCATGGGGGC CGGGGCCTTC CTGATGGCCT CGTTCCTGGG GGTGCCATTC GCGGAGGTGA TGGTGGCCGC CATAGTGCCC GCCCTCATAT ACTACGGGGC GGTGTTCCTA ATGGTCCGCC TGGAGGCCCA GAAGAGGGGA ATGAAGGGAC TTCCTCCGGA GGAGCTGCCC GATAGGAAAC GGGTGCTAAG GGGCATCTAC CTCTTCATAC CCATAGCGGT GCTGGTCTAC CTACTTATGT CCGGACGGTC TCCCATGTAC TCCGCCATGA TGGGAGCCCT GCTCTCCTGG CTGGTGTCCC TCCCCAAGCG GGAAACCCGT ATGGGGCTGA GAAGGACCCT GGATGCGATT CACGACGGGA TAAAGAACAT AACCCTGGTC TGCGTGGCCT GCGCCTCCGC CGGGGTGGCC TTAAGCTCCG TGTCGCTCAC CGGCATAGGC CAGAAGCTGG TCAGCTTTGT CCTCTCCTTC GCCAGCGGGG TACCCCTTTT GGCCCTGGTG CTGGTCATGC TGGTGTCGCT GGTGCTCGGT ATGGGGCTCC CCACCACCGG AGCCTACATC CTGGCATCCG CCCTGGGGGT CCCGATCCTA TCCAACCTGG GCTACCCCCT CATGGCGGCC CACATGTTCG TCTTCTACTA CGCCATCATA TCCAACATAA CCCCCCCGGT GGCCTTGGCG GCCTACGCGG CCAGCTCCAT CGCCGGATCG GATCCGAACA GGACCGGCTT CACCGCCTCC ATTCTGGGGG CACTGGCCTT CGTCACCCCC TTCGCCTTCT GTTATGACCA GGGGATCCTT CTTCAGGGCA CCTGGGCCCA GAACGTCTGG GGGATCCTCT CCTGCGTGGC CGCCGTGTTC GCCATCGGCT TCGGGATTAT GGGCTACTGC CAAAGGACCC TGATCCCCCT GGAGAGAGGG CTCTTCCTGG TCCTGGGTCT AGCCTGCCTG GTACCAAACC ATATGGTGAC CATCGGGGGG ATCCTTGGAA CCGGGGCCCT CTACGCGGCG ATCTCCCGGG GGATCCGAGG TTCTGGGAGC GCTTGA
|
Protein sequence | MRRLDGLIGK FMYLYVLGLG LFHVYTSVFG AFEAYLQRNL HLAMVMPLAF VFYPMGRRSP MDRVPLYDWI LAGLSTLPGL YVAFNYEEIT SRIIQVDPVT QVQLVLGILL FVLLMEATRR VVGLPLMVIS CVFAAYMLLG DKMPGIMRGL SFPLSEVVEQ LYLTDEGIFS MPLGVSATVV AAFLIFGGFL EKCGTGPYFM EVAQAFTGTA PGGPANIAVM SSCLFGSISG SAVANVYGTG TFTIPMMKRI GYEPHFAGAV EAVASTGGQI MPPVMGAGAF LMASFLGVPF AEVMVAAIVP ALIYYGAVFL MVRLEAQKRG MKGLPPEELP DRKRVLRGIY LFIPIAVLVY LLMSGRSPMY SAMMGALLSW LVSLPKRETR MGLRRTLDAI HDGIKNITLV CVACASAGVA LSSVSLTGIG QKLVSFVLSF ASGVPLLALV LVMLVSLVLG MGLPTTGAYI LASALGVPIL SNLGYPLMAA HMFVFYYAII SNITPPVALA AYAASSIAGS DPNRTGFTAS ILGALAFVTP FAFCYDQGIL LQGTWAQNVW GILSCVAAVF AIGFGIMGYC QRTLIPLERG LFLVLGLACL VPNHMVTIGG ILGTGALYAA ISRGIRGSGS A
|
| |