Gene Taci_1466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTaci_1466 
Symbol 
ID8631323 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermanaerovibrio acidaminovorans DSM 6589 
KingdomBacteria 
Replicon accessionNC_013522 
Strand
Start bp1526404 
End bp1528269 
Gene Length1866 bp 
Protein Length621 aa 
Translation table11 
GC content63% 
IMG OID 
ProductTRAP transporter, 4TM/12TM fusion protein 
Protein accessionYP_003317978 
Protein GI269793074 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGACGTC TTGACGGCTT GATCGGCAAG TTCATGTACC TGTACGTCCT AGGGTTGGGG 
CTGTTTCACG TTTACACCTC CGTCTTCGGT GCCTTCGAGG CCTACCTGCA GAGGAACCTG
CACCTGGCCA TGGTTATGCC CTTGGCCTTC GTCTTCTATC CCATGGGCAG GAGGTCCCCC
ATGGATCGGG TGCCCCTCTA CGACTGGATA CTGGCGGGGC TATCAACCCT GCCGGGGCTC
TACGTGGCGT TCAACTACGA GGAGATAACC TCAAGGATAA TCCAGGTGGA CCCGGTGACC
CAGGTCCAGC TGGTCCTTGG GATCCTTCTC TTTGTGCTTC TCATGGAGGC CACCCGGCGG
GTGGTGGGGC TGCCCCTCAT GGTGATATCC TGCGTCTTCG CCGCCTACAT GCTGCTGGGG
GACAAGATGC CAGGCATCAT GAGGGGGCTG TCGTTCCCGC TGAGCGAGGT GGTGGAGCAA
CTGTACCTCA CCGACGAGGG GATCTTCTCC ATGCCCCTTG GGGTTTCCGC CACGGTGGTG
GCCGCCTTTC TGATATTCGG CGGCTTCCTG GAGAAGTGCG GCACCGGCCC CTACTTCATG
GAGGTGGCCC AGGCTTTCAC CGGAACTGCC CCCGGTGGCC CCGCCAACAT AGCGGTCATG
AGCTCCTGCC TCTTCGGCTC CATATCCGGA TCTGCGGTGG CCAACGTCTA CGGCACCGGC
ACCTTCACCA TCCCGATGAT GAAGCGTATA GGGTACGAGC CCCACTTCGC CGGGGCGGTG
GAGGCGGTGG CCTCCACCGG GGGACAGATA ATGCCGCCGG TCATGGGGGC CGGGGCCTTC
CTGATGGCCT CGTTCCTGGG GGTGCCATTC GCGGAGGTGA TGGTGGCCGC CATAGTGCCC
GCCCTCATAT ACTACGGGGC GGTGTTCCTA ATGGTCCGCC TGGAGGCCCA GAAGAGGGGA
ATGAAGGGAC TTCCTCCGGA GGAGCTGCCC GATAGGAAAC GGGTGCTAAG GGGCATCTAC
CTCTTCATAC CCATAGCGGT GCTGGTCTAC CTACTTATGT CCGGACGGTC TCCCATGTAC
TCCGCCATGA TGGGAGCCCT GCTCTCCTGG CTGGTGTCCC TCCCCAAGCG GGAAACCCGT
ATGGGGCTGA GAAGGACCCT GGATGCGATT CACGACGGGA TAAAGAACAT AACCCTGGTC
TGCGTGGCCT GCGCCTCCGC CGGGGTGGCC TTAAGCTCCG TGTCGCTCAC CGGCATAGGC
CAGAAGCTGG TCAGCTTTGT CCTCTCCTTC GCCAGCGGGG TACCCCTTTT GGCCCTGGTG
CTGGTCATGC TGGTGTCGCT GGTGCTCGGT ATGGGGCTCC CCACCACCGG AGCCTACATC
CTGGCATCCG CCCTGGGGGT CCCGATCCTA TCCAACCTGG GCTACCCCCT CATGGCGGCC
CACATGTTCG TCTTCTACTA CGCCATCATA TCCAACATAA CCCCCCCGGT GGCCTTGGCG
GCCTACGCGG CCAGCTCCAT CGCCGGATCG GATCCGAACA GGACCGGCTT CACCGCCTCC
ATTCTGGGGG CACTGGCCTT CGTCACCCCC TTCGCCTTCT GTTATGACCA GGGGATCCTT
CTTCAGGGCA CCTGGGCCCA GAACGTCTGG GGGATCCTCT CCTGCGTGGC CGCCGTGTTC
GCCATCGGCT TCGGGATTAT GGGCTACTGC CAAAGGACCC TGATCCCCCT GGAGAGAGGG
CTCTTCCTGG TCCTGGGTCT AGCCTGCCTG GTACCAAACC ATATGGTGAC CATCGGGGGG
ATCCTTGGAA CCGGGGCCCT CTACGCGGCG ATCTCCCGGG GGATCCGAGG TTCTGGGAGC
GCTTGA
 
Protein sequence
MRRLDGLIGK FMYLYVLGLG LFHVYTSVFG AFEAYLQRNL HLAMVMPLAF VFYPMGRRSP 
MDRVPLYDWI LAGLSTLPGL YVAFNYEEIT SRIIQVDPVT QVQLVLGILL FVLLMEATRR
VVGLPLMVIS CVFAAYMLLG DKMPGIMRGL SFPLSEVVEQ LYLTDEGIFS MPLGVSATVV
AAFLIFGGFL EKCGTGPYFM EVAQAFTGTA PGGPANIAVM SSCLFGSISG SAVANVYGTG
TFTIPMMKRI GYEPHFAGAV EAVASTGGQI MPPVMGAGAF LMASFLGVPF AEVMVAAIVP
ALIYYGAVFL MVRLEAQKRG MKGLPPEELP DRKRVLRGIY LFIPIAVLVY LLMSGRSPMY
SAMMGALLSW LVSLPKRETR MGLRRTLDAI HDGIKNITLV CVACASAGVA LSSVSLTGIG
QKLVSFVLSF ASGVPLLALV LVMLVSLVLG MGLPTTGAYI LASALGVPIL SNLGYPLMAA
HMFVFYYAII SNITPPVALA AYAASSIAGS DPNRTGFTAS ILGALAFVTP FAFCYDQGIL
LQGTWAQNVW GILSCVAAVF AIGFGIMGYC QRTLIPLERG LFLVLGLACL VPNHMVTIGG
ILGTGALYAA ISRGIRGSGS A