| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Taci_1400 |
|---|
| Symbol | |
|---|
| ID | 8631256 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermanaerovibrio acidaminovorans DSM 6589 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013522 |
|---|
| Strand | - |
|---|
| Start bp | 1455463 |
|---|
| End bp | 1456992 |
|---|
| Gene Length | 1530 bp |
|---|
| Protein Length | 509 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | |
|---|
| Product | Na+/H+ antiporter NhaC |
|---|
| Protein accession | YP_003317913 |
|---|
| Protein GI | 269793009 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.226086 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGGAAG AGAGGAAGTA TCGCAAGCCT AGCCTGATGG AGGCCGTTTT GGTCCTCCTG
TTCAGTGCCG CCTTCATAGG AGCTGGGGTC CTTTATTGGG AGGTCTCGGT TCACATTCCC
ATAGTGGTGG CCGCCACGGT GGCCTCTTTG GTTGGAAGGT TCGTCCTTGG TCGTCCCTGG
AGGGACATAG AGGAGGGGAT GGTTAACGGC ATCATGGTTG GCATGCAGGC CATGCTCATC
CTCTACATTA TAGGGATGTT GGTTGGCACC TGGATCCCCG GCGGAGTGGT TCCCAGCATG
ATCTACTATG GTCTGTCCAT ACTCAATCCT GCGGCCTTCC TCCTCACCGC CCTGATAATA
TGCTCCATAG TCTCCTTCGC CACCGGCACC TCCTGGGGGA CCAGCGGCAC GGTGGGCATC
GCCCTAATGG GAATAGGTGC GGGGCTTGGC ATACCGGCCC CGATAACGGC GGGCTTTATA
ATCTCCGGCG CTTACGTGGG GGACAAGATG TCGCCTCTGT CGGACACCAC CAACCTTGCT
CCTGCGGTGG CGGGCACCGA CCTTTTCCAG CACATAAGGG CCATGATGTG GACAACCCTT
CCTACCTATG CCATAGTCTG CGTGGCGGCG GTCTTCCTGG GGATGAAGTA TGCCGGGGGA
ACCCTTGATG TGGCCAAGAT AAAGGCCATT CAGGCGGTGC TTGCCGGGGA GTTCAACATA
AGCCTGATGG GGCTCATCCC TCCGATCCTG GTCATACTCA TGTGTGTCAT GAAGATTCCC
GCGATACCTG GCCTCTTCGC CGGTGTGGTG GCCGGCGGTG TTCTGGCCCT GTTCAACGGT
TACGGCGTTG GGGACATCCT CAGCGTAACC CTGGATGGTT ACTCCGCCAA GCTAGCGGCG
GATCTAGCCA ACGCGGGAGA CATGGCGACG GTGGCCAAGC TTATGCAAGA GGCGGGCATC
TCTGGTGTAA CGCCCGAGAT GGCCAAGGAG GTTGGAACGC TTCTAAGCGA CCTTCTGACC
AGGGGCGGTA TGATGTCCAT GGCCAACACC ATCGCCCTCA TAACCTGCGC CTTGGCTTTC
GGAGGCATCA TGGAGCGGTG CGGCTTCCTG GAGGTCATCC TGGATAACGT CCTTAGGGTT
GTCCGCTCGG TGGGGGGGCT TGCCACCTCC GTCATAGTGG CTAGCTTCAT ATCGAACCTC
TTCCTGGGTG ACCAGTACCT GTCCATCGCG ATGCCGGGCC GAATCTTCAA GCCCGCCTTC
GAGTGGAAGG GGCTGCATCC GAGGATGCTC TCCCGGAGTC TAGAGGACAG CGGGACTCTG
ACATCGGTTC TGATCCCGTG GAACACCTGT GGGGCCTACA ACTCGGGTGT TCTGGGGGTT
CCAACCGTCC AGTACGCCCC CTTCGCCATC CTCAACTGGC TCAACCCCAT AATGGCCATC
ACCATCACCT ACCTTGGCAT AGGGGTGGCC TGGAAGGGCA AGGACGGGGA GCCGGTCATA
GCGAAGGAGA GGCCCGCGGA ACTGGCGTGA
|
|---|
| Protein sequence | MTEERKYRKP SLMEAVLVLL FSAAFIGAGV LYWEVSVHIP IVVAATVASL VGRFVLGRPW
RDIEEGMVNG IMVGMQAMLI LYIIGMLVGT WIPGGVVPSM IYYGLSILNP AAFLLTALII
CSIVSFATGT SWGTSGTVGI ALMGIGAGLG IPAPITAGFI ISGAYVGDKM SPLSDTTNLA
PAVAGTDLFQ HIRAMMWTTL PTYAIVCVAA VFLGMKYAGG TLDVAKIKAI QAVLAGEFNI
SLMGLIPPIL VILMCVMKIP AIPGLFAGVV AGGVLALFNG YGVGDILSVT LDGYSAKLAA
DLANAGDMAT VAKLMQEAGI SGVTPEMAKE VGTLLSDLLT RGGMMSMANT IALITCALAF
GGIMERCGFL EVILDNVLRV VRSVGGLATS VIVASFISNL FLGDQYLSIA MPGRIFKPAF
EWKGLHPRML SRSLEDSGTL TSVLIPWNTC GAYNSGVLGV PTVQYAPFAI LNWLNPIMAI
TITYLGIGVA WKGKDGEPVI AKERPAELA
|
|---|
| |