| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Taci_1371 |
|---|
| Symbol | |
|---|
| ID | 8631224 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermanaerovibrio acidaminovorans DSM 6589 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013522 |
|---|
| Strand | + |
|---|
| Start bp | 1417107 |
|---|
| End bp | 1418660 |
|---|
| Gene Length | 1554 bp |
|---|
| Protein Length | 517 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | citrate lyase, alpha subunit |
|---|
| Protein accession | YP_003317884 |
|---|
| Protein GI | 269792980 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGGTTA ACCGGGCGGG ACGTTCCGTG CCGGACCACA TAGAGGGCTA CGGACCGGTG
CGTCACTATG AGGGGGCCTT CGAGAGGCTC CCTCAGGGGC CCAAGGTGGG GCCCCTGATC
AGGAGGGCCA GGGACGGGGC GTCCTCCAAG GTGCTCAAGG ACCTCAAGGA GGCCATCGAG
GCATCGGGGC TCAAAAGCGG CATGACCGTA TCGTTCCACC ACCACCTGCG CAACGGGGAC
ATGGTGGTTA ACCAGGTGAT ACGAACCTGC GCGGAGATGG GGATCGGGGA TCTTACCATC
TTCCCCACCG CCCTCTTCGG GGTCCACAGA GAGCTGATGG AGCACATAAG GTCCGGGGTG
GTTCGCCGGA TAATGGGGTC CGTGAACGGC CCCATAGGGC GGCTGGTCTC CGAGGGGGGC
ATGGCGGAGC CGGTGGTGCT CCGAAGCCAC GGGGGACGCC CCCGGGCGGT GGCCTCCGGG
GACGTGAAGA TAGACGTGGC CTTCATAGCC GCCCCATCGG CGGACCGGCA CGGCAACCTG
TCTGGATCCC AGGGCAGGAG CGCCTGCGGC TCCCTGGGCT ACGCCTTCAC CGACGCCATG
TACGCGGACC ACGTGGTGGC GGTGACCGAC AACCTGGTGG AGGGTACCCT CTGCCCCATC
TCCATTCCCC AGATCTACGT GGACCACGTG GTCAAGGTGG ACTCCATCGG GGATCCGGCG
GGGATCGTGT CGGGCAGCAC CAGGATAACC AAGGACCCGT TGAGGCTCCT CATAGCCCGG
ATGGCTTCGG AGCTCATCGA GGCCTCCCCC TACTTCAGGG ACGGGATCTC ATTCCAGACC
GGGGCGGGGG GCATACCCCT GGCGGTGACC GCCTTCCTCA AGGAGGCCAT GATCCGACGG
GGGGTCAAGG GGAGCTTCGG CCTGGGGGGT ATAACCGGCT ACTTCGTGGA GTTGCTCAAG
GAGGGGTTGC TGGAGTGCCT CATGGACGTG CAGTCCTTCG ACCTGGAGGC GGTTAGGTCC
ATAGCCTCCG ACGGTCGCCA CATGGAGATC TCCGCCGAGT GGTACGCCAG CCCCTGGACC
TGCGGCAGCG CGGTGGACAG CCTGGACGCG GTTATCCTGG GGGCCACGGA GGTGGACCTG
GACTTCAACG CCAACGTGAA CACCGAGGCG GACGGCTACC TGCTCCACGG CATAGGGGGG
CACCAGGACA CCGCCGCGGG GGCGAAGCTC ACCATAATAG CCCAGCCCCT CCTTCGGGGC
CGGATACCCT GCGTGGTGGA CCGGGTCCAC TGCGTCACCA CCCCCGGTGA GGTGGTGGAC
GCGGTGGTCA CCGAGTTCGG CATCACTGTG AACCCTAGGA GGGAGGACTT GCTGGAGGCC
GCCCGGGAGG CCAGGCTCCC CCTGATATCC ATGGAGGAGC TGCTGCATCG AGCCCGCCGG
ATCTCGGGCC CCATGGACCC CCTGCCCCAG GAGGACCGGA TCGTGGCGGT GGTGGAGTGG
CGGGACGGCA CGGTGATCGA CGTGATAAGA CAGGTCAAAC CCAAGGCCCG GTGA
|
|---|
| Protein sequence | MTVNRAGRSV PDHIEGYGPV RHYEGAFERL PQGPKVGPLI RRARDGASSK VLKDLKEAIE
ASGLKSGMTV SFHHHLRNGD MVVNQVIRTC AEMGIGDLTI FPTALFGVHR ELMEHIRSGV
VRRIMGSVNG PIGRLVSEGG MAEPVVLRSH GGRPRAVASG DVKIDVAFIA APSADRHGNL
SGSQGRSACG SLGYAFTDAM YADHVVAVTD NLVEGTLCPI SIPQIYVDHV VKVDSIGDPA
GIVSGSTRIT KDPLRLLIAR MASELIEASP YFRDGISFQT GAGGIPLAVT AFLKEAMIRR
GVKGSFGLGG ITGYFVELLK EGLLECLMDV QSFDLEAVRS IASDGRHMEI SAEWYASPWT
CGSAVDSLDA VILGATEVDL DFNANVNTEA DGYLLHGIGG HQDTAAGAKL TIIAQPLLRG
RIPCVVDRVH CVTTPGEVVD AVVTEFGITV NPRREDLLEA AREARLPLIS MEELLHRARR
ISGPMDPLPQ EDRIVAVVEW RDGTVIDVIR QVKPKAR
|
|---|
| |