Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Taci_1223 |
Symbol | |
ID | 8631072 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermanaerovibrio acidaminovorans DSM 6589 |
Kingdom | Bacteria |
Replicon accession | NC_013522 |
Strand | - |
Start bp | 1270502 |
End bp | 1271665 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | RNA polymerase, sigma 70 subunit, RpoD subfamily |
Protein accession | YP_003317737 |
Protein GI | 269792833 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0115586 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACGACA TCAACAGGAA GGAAGAGGAC GTCAGGGTGG AAGGGGAGGT GGCAGCCCCG GAGGCCTCAG CGGACAACAT GATGGACTAC ATCGAGAACG TGAGGGACCT GCTCCACGAC GCCCGGGAGA AGGGGTTCGT CACCTACGAT GACATAGAGA AGCACCTCCC CAAGGAGCTC CTGTCCGCCG ACGTGCTGGA CAACCTCTAC TACAACCTTA TGGAGCTGGG CATAGACGTG GTGGACGAGA CGAAGGCCCA GCGGGGGGAT AGCATAGGGG AGGAGGTACT CCCCCAGATA TCCCCAGCGG ACGACCTGGG GGACCTTGAG GACCTGCCCC TGTCGGACCC GGTCAGGATG TACCTCCGGG AGATAGGCCG GATACCCCTC CTGTCCCCCG AGGAGGAGGT GGAGCTGGCC AAGGGGGTCG AGGCGGGGGA CAAGAGGGCC AAGGAGAAGC TGGTGGAGGC CAACCTGCGG CTGGTGGTCA GCATAGCCAA GAAGTACATA GGCCGGGGCA TGCTCTTCCT GGACCTGATC CAGGAGGGTA ACCTGGGGCT CATCCGGGCG GTGGAGAAGT TCGACTACCG CAAGGGCTAC AAGTTCAGCA CCTACGCCAC CTGGTGGATA AGGCAGGCCA TAACCAGGGC CATAGCCGAC CAGGCCAGGA CCATAAGGAT CCCGGTCCAC ATGGTGGAGA CCATAAACAA GCTTATCCGG ATCTCCCGGG TGCTGGTCCA GCGGCTGGGG AGGGAGCCAT CGGCGGAGGA GATAGCCCAG GAGATGGGGG TCACGGTGGA CCGGGTGGAG GAGATCCAGA AGATAGCCCA GGAGCCGGTC TCCCTGGAGA CCCCCATAGG GGAGGAGGAG GACAGTCAGC TGGGGGACTT CCTGGAGGAC AAGGACCTCC CCAGTCCCGA CGAGGCGGCG GCCAACCAGA TCCTCCGGGA ACAGCTGGAG GAGATGCTGG AGGACCTGAC CGACCGGGAG AAGGAGGTGT TGCGCCTCAG GTTCGGTCTT GAGGACGGCC ACTCCCACAC GCTGGAGGAG GTGGGGCGCA GGTTCGGCGT GACCCGGGAG AGGATAAGAC AGATAGAGGC CAAGGCCCTG AGGAAGCTGA GACACCCCAG CAGGAGCAAG CGGCTCCGGG ACTTCCTGGA CTAG
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Protein sequence | MDDINRKEED VRVEGEVAAP EASADNMMDY IENVRDLLHD AREKGFVTYD DIEKHLPKEL LSADVLDNLY YNLMELGIDV VDETKAQRGD SIGEEVLPQI SPADDLGDLE DLPLSDPVRM YLREIGRIPL LSPEEEVELA KGVEAGDKRA KEKLVEANLR LVVSIAKKYI GRGMLFLDLI QEGNLGLIRA VEKFDYRKGY KFSTYATWWI RQAITRAIAD QARTIRIPVH MVETINKLIR ISRVLVQRLG REPSAEEIAQ EMGVTVDRVE EIQKIAQEPV SLETPIGEEE DSQLGDFLED KDLPSPDEAA ANQILREQLE EMLEDLTDRE KEVLRLRFGL EDGHSHTLEE VGRRFGVTRE RIRQIEAKAL RKLRHPSRSK RLRDFLD
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