| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Taci_1192 |
|---|
| Symbol | |
|---|
| ID | 8631040 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermanaerovibrio acidaminovorans DSM 6589 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013522 |
|---|
| Strand | - |
|---|
| Start bp | 1234933 |
|---|
| End bp | 1238538 |
|---|
| Gene Length | 3606 bp |
|---|
| Protein Length | 1201 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | |
|---|
| Product | DNA-directed RNA polymerase, beta subunit |
|---|
| Protein accession | YP_003317706 |
|---|
| Protein GI | 269792802 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGTAG AAGTTCCTTC CCTCATGGCG CCAAGACGGT ATCTGGGCAA GCAGAAGGAC
CTGATCGAGC TGCCGGACCT GGTGGAGGTC CAGCGTCACT CATACGAGTG GTTCTTTCAG
GCGGACGAGG ACCCTAACTT CAGGAGGCTT CAGGGTCTTC AGGAGCTGTT CAAAGAGGTA
TTCCCCATCG AGAGCTACGA CGGAAACTTC GCCCTGGAGT TCGTCCGTTA CTACGTGGAT
CCCCCGACCA TAAGCATCGA GGAGGCCCGG GAGAGGGATC TCACCTGGTC TAGGCCCATA
AGGGCCACCA TAAGGCTGGT GAACCGGAGC AACGGGGAGA TCAAGGAGGA GGAGGTCTAC
CTGGGGGACT TCCCGGTGAT GACCGACCGG GGCACCTTCA TCATCAACGG CACCGAGCGG
GTGGTGGTGA GCCAGCTGGC CCGCTCCGCC GGAGTCTACT TCTCCGCGGA CCTGTCCTCC
CCGGGCCAGG AGACCTACGC GGCCAAGCTG ATCCCCGACC GGGGGGCCTG GTTGGAGTTC
GACCTTACCC CCAGCGAGTT CCTGTCGGTT AAGATCGACA ACCGGAAGAA GATCCCGGTC
ACCATGTTCC TCAAGGCCCT TGGGGTCCCC ACGGACGACG AGCTCCTCAG GCTCTTCGGC
GCCACGGTGG AGGAGGTTGA CGTGGTGGAG GAGGACGTGA GGGGCATGCT CCTGGCGGAG
CCCATCGTAG GGTCCGACGG GAGGGTCATC TTCCACAAGA ACGACCGGAT AACCAAGGAG
CACCTGGACG AGCTCTGGAA GCAGGGTCGC ACCCGGGTGG CGGTGTGGCG GGTGGATCAC
TCGGTGGCGG AGACCCTGGA GAAGGACCCC ACCAGCTCCA CCGATGAGGC CATGCTGGAG
ATCTTTCGTC GTCTGAAGCC CAACGAGCCC CCCCGGATGG AGAACGCCCG GGAGCACATG
CACAGCCTCT TCTTCGACAG CCGCCGGTAC AACCTGGGGC GGGTGGGCCG CTACAAGCTG
AACCGGCGCC TGGGGCTCCA GGTGGACGAT GAGCAGCGGT TGCTCACCGT GGAGGACGTG
GTGGCCATCG TCAACGGGTT GCTCAAGCTC CGGGACGGGC TTGAGCGGGA GGACGACATC
GATCACCTGG GGAACCGCCG GGTGAGGGCC ATAGGGGAGC TTCTGCAGAA CCAGGTTAGG
ATAGGGCTCC TCAGGATGGA GCGGATAGCC AAGGAGAGGA TGACCACCAT CCCGGACTTA
AGCTCCGCCA CCGCCAAGGA CCTGATCAAC GTGCGTCCCA TAAGTGCCGC CCTGCGGGAG
TTCTTCGGCT CCGGCCAGCT GTCCCAGTTC ATGGATCAGA CCAACCCGTT GGCGGAGCTG
ACCCATAGGC GGCGTCTGTC CGCCTTGGGT CCCGGCGGTC TGTCCCGGGA GAGGGCCGGG
TTCGAGGCCC GGGACGTGCA CTACACCCAC TACGGGCGGA TCTGTCCCAT CGAGACCCCC
GAGGGATCCA ACATAGGGCT GGTCACCTCC CTGGCCACCT ACGCCAAGAT AAACGAGTAC
GGCTTCCTGG TGACCCCTCG GCGGCGGGTG GTGGACGGCC GGGTGACCGG TGAGGTGGTC
TACCTGTCCG CGGACGACGA GGACGAGTAC AACGTGGGCA TGGCCAGCAC CCCGGTGGGT
GAGGATGGGA GCATCCTCAT CGACGAGGTC CACGTGCGTC ACCGGGGGGA CATCCGGATG
GTCCCCAAGG ATCAGGTGGA CTTCCTGGAC GTCTCTCCCA AACAGATAGT GTCCGTCTCC
ACCGGGTTGA TCCCGTTCCT CGAGCACGAC GACGCCAACC GGGCCCTGAT GGGGTCCAAC
ATGCAGCGTC AGGCGGTGCC CCTGGTGAGG GCCGAGGCCC CCCTGGTGGG GACCGGCATA
GAGGCCAAGA TAGCCCGGGA CTCCGGGTCC TGCATCCTGG CCCGTCGGTC CGGCACCGTG
GAGTTCGTGG ACGCGGACCG GGTGGTCATA AGGGCCGAGG ACGGCACCCT GAATCAGTAC
CGGCTGGTCA AGTTCCGCCG GTCCAACCAG GGGACGGTGA TCCACCAGAG ACCCCTGGTG
AGGAAGGGGG ACCCGGTGAA GGCCGGGGAC GTGATAGCCG ACGGGCAGGC CTGCCAGGGG
GGCGAGCTGG CCCTGGGTCG GAACGTGCTG GTGGCCTTCG TCTCCTGGGA GGGCTACAAC
TTCGAGGACG CCATCCTGCT CAGCCAGCGG GTGGTGAAGG AGGACTACTA CACCTCGATC
CACATAGAGG AATACGAGGT GGAGGCCCGG GACACCAAGC TGGGGCCCGA GGAGATAACC
CGGGACATCC CCAACGTGGG GGACGATGCC CTGAAGAACC TGGACGAGAA CGGCATAGTC
CGCATAGGCG CCGAGGTCCG GGCGGGGGAC ATCCTGGTGG GCAAGGTGAC CCCCAAGGGG
GAGTCGGACC AGTCGCCGGA GGAGAGGCTC CTTCGGGCCA TCTTCGGTGA GAAGGCCCGG
GAGGTGAGGG ACTCCTCCCT CCGGGTGCCC CACGGCGAGG GTGGCAAGGT GGTGGCCATA
AAGAGGCTCA GCCGGGAGCA CAACAGCGAG GACCTGAGTC CTGGGGTCAA CGAGGTGGTC
AAGGTCTACG TGGCCCAGTT CAGGAAGATC ACCGAGGGGG ACAAGATGGC GGGCCGCCAC
GGCAACAAGG GTGTGGTGTC CAAGATCCTG CCCGAGGAGG ACATGCCCTT CCTGTCGGAC
GGCACCCCGG TTGACGTGGT GCTGAACCCC CTTGGGGTGC CCAGCCGAAT GAACCTGGGG
CAGGTGTTCG AGACCGTCAT GGGCTTCGTG GCCATGCACA ACGGCTGGAA GGTGGCCACC
CCGGTCTTCG AGGGGGCGGA CCAGGAGGAG ATATTCCAGC TGGTGGACAA GATAAGGGAG
AACAAGTACC CGGAGCTGAC GAGGGATTGC AAGATAACCC TCTACGACGG CCGAACCGGG
GAGCCCATGG ACAAGAAGGT CACCGTGGGG GTCATGTACA TGCTCAAGCT GATCCACCTG
GTGGACGACA AGATCCACGC CCGGTCCACC GGTCCGTACA GCCTGATAAC CCAGCAGCCC
CTGGGAGGCA AGACCCAGTT CGGCGGTCAG CGGTTCGGTG AGATGGAGGT TTGGGCCCTG
GAGGGTTACG GGGCGGCCCA CATGCTCCAG GAGATCCTGA CGGTCAAGTC CGACGACATC
CGGGGCAGGC TCAAGACCTA CGAGCGGATT GTCAAGGGGC AGAACCTGGC GAAGCCCGGG
GTGCCAGAGA GCTTCCGGGT GCTCATAAAG GAGCTCCAGG GGCTTGGGGT CGACGTGGAG
ATAGTGTACG AGGATGGGAC CGTTGGGGAG CTCGTCATGG GGGACGACGA AGACGAGCCC
GGCAGGAGCA GGCCCCGGGA GGGCAGGGAT CTCTTCGAGT CCGGCGTGAG CCCCGAGGAC
GCCTTCGGGG TCAGCGGGGA GGAGATCAGC CAGGAGGAGG CCCGGGAGGG GCTTGGGGAC
GTGTTCACCG TCCGGGATGC CTCCGATGAC CCCTTTTTTG CGGACGATGA GGAGGGGGAC
GCTTAA
|
|---|
| Protein sequence | MAVEVPSLMA PRRYLGKQKD LIELPDLVEV QRHSYEWFFQ ADEDPNFRRL QGLQELFKEV
FPIESYDGNF ALEFVRYYVD PPTISIEEAR ERDLTWSRPI RATIRLVNRS NGEIKEEEVY
LGDFPVMTDR GTFIINGTER VVVSQLARSA GVYFSADLSS PGQETYAAKL IPDRGAWLEF
DLTPSEFLSV KIDNRKKIPV TMFLKALGVP TDDELLRLFG ATVEEVDVVE EDVRGMLLAE
PIVGSDGRVI FHKNDRITKE HLDELWKQGR TRVAVWRVDH SVAETLEKDP TSSTDEAMLE
IFRRLKPNEP PRMENAREHM HSLFFDSRRY NLGRVGRYKL NRRLGLQVDD EQRLLTVEDV
VAIVNGLLKL RDGLEREDDI DHLGNRRVRA IGELLQNQVR IGLLRMERIA KERMTTIPDL
SSATAKDLIN VRPISAALRE FFGSGQLSQF MDQTNPLAEL THRRRLSALG PGGLSRERAG
FEARDVHYTH YGRICPIETP EGSNIGLVTS LATYAKINEY GFLVTPRRRV VDGRVTGEVV
YLSADDEDEY NVGMASTPVG EDGSILIDEV HVRHRGDIRM VPKDQVDFLD VSPKQIVSVS
TGLIPFLEHD DANRALMGSN MQRQAVPLVR AEAPLVGTGI EAKIARDSGS CILARRSGTV
EFVDADRVVI RAEDGTLNQY RLVKFRRSNQ GTVIHQRPLV RKGDPVKAGD VIADGQACQG
GELALGRNVL VAFVSWEGYN FEDAILLSQR VVKEDYYTSI HIEEYEVEAR DTKLGPEEIT
RDIPNVGDDA LKNLDENGIV RIGAEVRAGD ILVGKVTPKG ESDQSPEERL LRAIFGEKAR
EVRDSSLRVP HGEGGKVVAI KRLSREHNSE DLSPGVNEVV KVYVAQFRKI TEGDKMAGRH
GNKGVVSKIL PEEDMPFLSD GTPVDVVLNP LGVPSRMNLG QVFETVMGFV AMHNGWKVAT
PVFEGADQEE IFQLVDKIRE NKYPELTRDC KITLYDGRTG EPMDKKVTVG VMYMLKLIHL
VDDKIHARST GPYSLITQQP LGGKTQFGGQ RFGEMEVWAL EGYGAAHMLQ EILTVKSDDI
RGRLKTYERI VKGQNLAKPG VPESFRVLIK ELQGLGVDVE IVYEDGTVGE LVMGDDEDEP
GRSRPREGRD LFESGVSPED AFGVSGEEIS QEEAREGLGD VFTVRDASDD PFFADDEEGD
A
|
|---|
| |