Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Taci_1152 |
Symbol | |
ID | 8631000 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermanaerovibrio acidaminovorans DSM 6589 |
Kingdom | Bacteria |
Replicon accession | NC_013522 |
Strand | - |
Start bp | 1208321 |
End bp | 1209160 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003317666 |
Protein GI | 269792762 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00740539 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCCATAG AGGTTTCGGA GCTTCACCAT GTCTACCATA GGGGTACCCC CCTGGAGTAT CACTCCTTGA GGGGGGTGTC CTTTGAACTG TCTCCCGGGG ACTGGGTCTC CGTTGTGGGC CACACGGGGA GCGGCAAGTC CACCCTGGCC CAGCACCTGA ACGGTCTGAT CAGGCCCCAA CGGGGCAGGG TGGTGGTGGA CGGGATATCC ACCGACGGAT CCCCCAAGGA GCTGAGGGAG GTCCGCCGCC GGGTGGGGCT GGTTTTCCAG TTCCCGGAGC AGCAGCTCTT CGCGGACACG GTTTACGACG AGGTGGCCTT CGGCCCCAGG AACTGGGGCT TCCCGGAAGA GGAGGTGCGC CGTTTGGTGT TTGAGGCCCT GGAGGCGGTG GGGCTTCCTG AGTCCATGGT GGCTTCGAAC CCCATGGGGC TATCGGGGGG GCAGAGGCGG AGGGTGGCCA TCGCGTCGGT GATCTCATCC AACCCGGCGT ATCTGGTGCT GGACGAACCC ACCGCCGGAT TGGACGCCCG GGGGATAGAG GAGCTGATAT CCCGCCTAAA CTCCCTTCGG TCCCGGGGGA TCGGGGTGTG TCACATAACC CACGACCTGG AGATGGCTCT CGAACACAGC TCCAGGATCC TGGTGCTGTC CGACGGGGAG GTGGCCCTCT GGGGGACCCC ATCGGAGGTG GCGGACCGGC TGGTCAGGGA TCCGATCCGG GGGCTGGTGG TCCCCTCGGT GCTCCAGCTG GCCCTGGATC TCCGCCGCAG GGATCTTCCG GTGCCCCTCA CCTGGGAGCC CGGGAGGCTG GCGGGGGCCA TCAAGGAGAT GAGAGGATGA
|
Protein sequence | MSIEVSELHH VYHRGTPLEY HSLRGVSFEL SPGDWVSVVG HTGSGKSTLA QHLNGLIRPQ RGRVVVDGIS TDGSPKELRE VRRRVGLVFQ FPEQQLFADT VYDEVAFGPR NWGFPEEEVR RLVFEALEAV GLPESMVASN PMGLSGGQRR RVAIASVISS NPAYLVLDEP TAGLDARGIE ELISRLNSLR SRGIGVCHIT HDLEMALEHS SRILVLSDGE VALWGTPSEV ADRLVRDPIR GLVVPSVLQL ALDLRRRDLP VPLTWEPGRL AGAIKEMRG
|
| |